Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 MIR6867-201ENST00000610636 67 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC008013.2-202ENST00000637965 364 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC008432.1-201ENST00000615912 1320 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RNF6Q9Y252 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
RNF6Q9Y252 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RNF6Q9Y252 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.84□□□□□ -1.8
RNF6Q9Y252 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.84□□□□□ -1.8
RNF6Q9Y252 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.84□□□□□ -1.8
RNF6Q9Y252 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.84□□□□□ -1.8
RNF6Q9Y252 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
RNF6Q9Y252 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNF6Q9Y252 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
RNF6Q9Y252 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNF6Q9Y252 Y_RNA.110-201ENST00000363220 99 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 RNU6-481P-201ENST00000384194 107 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 MIR3074-201ENST00000384885 81 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 MIR1179-201ENST00000408703 91 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 RNA5SP36-201ENST00000410197 133 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 COX6B1P7-201ENST00000430845 235 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.83□□□□□ -1.8
RNF6Q9Y252 RPL6P5-201ENST00000445678 828 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.83□□□□□ -1.8
RNF6Q9Y252 DNAJC19P8-201ENST00000452887 259 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 MRPL35P4-201ENST00000453682 566 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.83□□□□□ -1.8
RNF6Q9Y252 CYCSP20-201ENST00000473154 315 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 RNA5SP519-201ENST00000516480 119 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 AC023632.4-201ENST00000517783 191 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 NARSP2-201ENST00000518524 679 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.83□□□□□ -1.8
RNF6Q9Y252 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.83□□□□□ -1.8
RNF6Q9Y252 MTCO1P49-201ENST00000523429 802 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.83□□□□□ -1.8
RNF6Q9Y252 AC006116.5-201ENST00000591936 559 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 BNIP3P22-201ENST00000593399 556 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 AL161729.3-201ENST00000603533 673 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 AL392112.1-201ENST00000605115 829 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 AC245389.1-201ENST00000605141 529 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.83□□□□□ -1.8
RNF6Q9Y252 FRG1HP-204ENST00000617940 757 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 AC017104.5-201ENST00000637647 639 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 MFSD8-213ENST00000641134 1327 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.83□□□□□ -1.8
RNF6Q9Y252 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RNF6Q9Y252 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNF6Q9Y252 MARK2P15-201ENST00000432204 2186 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.83□□□□□ -1.8
RNF6Q9Y252 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RNF6Q9Y252 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNF6Q9Y252 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
RNF6Q9Y252 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF6Q9Y252 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 RNU1-14P-201ENST00000362759 152 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 SNORD56.4-201ENST00000363883 71 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 RN7SKP202-201ENST00000410439 330 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 RN7SKP235-201ENST00000410662 305 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 AC019070.1-201ENST00000415008 1024 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 AL389915.1-201ENST00000422463 466 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 AC073310.1-201ENST00000423226 1033 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 AL157831.1-201ENST00000426134 473 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 AC087650.1-201ENST00000431445 468 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 MRPL50P1-201ENST00000431951 384 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 PPIAP17-201ENST00000438507 471 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 AL162151.2-201ENST00000448875 158 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 OR5H3P-201ENST00000502817 919 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 AC010342.1-201ENST00000514047 877 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 RN7SKP82-201ENST00000516786 223 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 AC105233.3-201ENST00000531125 744 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 AC093510.2-201ENST00000562820 896 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 MIR4429-201ENST00000580105 73 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 MIR4286-201ENST00000580651 93 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RNF6Q9Y252 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 AC098483.2-201ENST00000603158 454 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 AC005776.1-201ENST00000603164 290 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 AC026741.1-201ENST00000605892 482 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 AC112503.2-201ENST00000609005 552 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms