Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 RANP9-201ENST00000519957 271 ntBASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 VTA1P2-201ENST00000520205 911 ntBASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 AC008489.1-201ENST00000524271 483 ntBASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 BMS1P7-201ENST00000602440 1052 ntBASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 AC034236.3-201ENST00000605999 461 ntBASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 AL442067.2-201ENST00000614033 363 ntBASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 AC243312.2-201ENST00000623340 601 ntBASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
RPAP1Q9BWH6 AC007342.9-201ENST00000623877 1385 ntBASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 NDUFB4P4-201ENST00000404822 243 ntBASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 RHEBP3-201ENST00000411920 351 ntBASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 NDUFB1P1-201ENST00000435191 180 ntBASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 PPIAP3-201ENST00000450588 505 ntBASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 AC010307.1-201ENST00000467206 836 ntBASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 MTND3P6-201ENST00000485242 339 ntBASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 RN7SKP83-201ENST00000516512 178 ntBASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 OR8X1P-201ENST00000534542 869 ntBASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 RPL21P12-201ENST00000559810 515 ntBASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 MIR5195-201ENST00000583555 115 ntBASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 BNIP3P7-201ENST00000605641 516 ntBASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 AC092159.4-201ENST00000624944 550 ntBASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 OR6C71P-202ENST00000641886 1107 ntBASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 AL356274.2-201ENST00000624379 3752 ntBASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 AL035425.3-201ENST00000564206 4996 ntBASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.7
RPAP1Q9BWH6 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 AC234772.1-201ENST00000377927 937 ntBASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 AC009263.1-201ENST00000441193 1239 ntBASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 AC022431.1-201ENST00000450941 438 ntBASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 MTCO3P16-201ENST00000454456 754 ntBASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 AC009268.1-201ENST00000561352 1203 ntBASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 AC023813.4-201ENST00000607580 580 ntBASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 AC006946.3-201ENST00000609791 756 ntBASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 PRO1804-201ENST00000623780 2050 ntBASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 ASNSP1-201ENST00000518311 1939 ntBASIC4.45□□□□□ -1.7
RPAP1Q9BWH6 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 USP8P1-201ENST00000494673 3183 ntBASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 MIR423-201ENST00000362201 94 ntBASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 RNU6-283P-201ENST00000364788 107 ntBASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 MIR634-201ENST00000385208 97 ntBASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 MIR1183-201ENST00000408856 89 ntBASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 RPL30P2-201ENST00000414021 291 ntBASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 MTND2P2-201ENST00000434633 945 ntBASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 RPS29P31-201ENST00000446147 164 ntBASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 AC092045.1-201ENST00000495716 1231 ntBASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 SNORA70.17-201ENST00000516449 133 ntBASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 OR7E13P-201ENST00000526052 910 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms