Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CSPG4P5Q96PW8 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CSPG4P5Q96PW8 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CSPG4P5Q96PW8 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CSPG4P5Q96PW8 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 MTND4P10-201ENST00000446199 1363 ntBASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 SAGE2P-201ENST00000420011 2126 ntBASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 RNU6-283P-201ENST00000364788 107 ntBASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 U8.11-201ENST00000384699 133 ntBASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 U8.12-201ENST00000384701 133 ntBASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 RPS12P23-201ENST00000419579 400 ntBASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 BMS1P19-201ENST00000433925 393 ntBASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 MTND2P8-201ENST00000450555 1025 ntBASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 U8.18-201ENST00000459285 133 ntBASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 NIPA2P2-201ENST00000496376 1083 ntBASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 RNA5SP309-201ENST00000516670 106 ntBASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 AC074029.2-201ENST00000551045 634 ntBASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 TRAV15-201ENST00000556680 249 ntBASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 AC067852.4-201ENST00000590314 478 ntBASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 AC244205.2-202ENST00000635781 342 ntBASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 AC006042.3-201ENST00000454684 1469 ntBASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.79□□□□□ -1.8
CSPG4P5Q96PW8 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 MIR7-1-201ENST00000384871 110 ntBASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 AL445189.1-201ENST00000405722 338 ntBASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 MTHFD2P2-201ENST00000407725 247 ntBASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 SNORA57.3-201ENST00000411095 141 ntBASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 AC017083.1-201ENST00000428093 483 ntBASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 MTCO1P52-201ENST00000433928 531 ntBASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 AC087385.1-201ENST00000475062 312 ntBASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 AC104997.1-201ENST00000519761 717 ntBASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 AC023161.2-201ENST00000551218 780 ntBASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 AC023158.1-201ENST00000561632 1025 ntBASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 HSPA8P1-201ENST00000425843 1833 ntBASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
CSPG4P5Q96PW8 ASNSP1-204ENST00000641977 1664 ntBASIC3.78□□□□□ -1.81
CSPG4P5Q96PW8 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 U3.15-201ENST00000365398 212 ntBASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 AC007066.1-201ENST00000392902 381 ntBASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 AL391417.1-201ENST00000404100 426 ntBASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 AL159169.1-201ENST00000421119 127 ntBASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 HMGB3P5-201ENST00000428894 612 ntBASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 AC245517.2-201ENST00000442890 346 ntBASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 NPM1P17-201ENST00000479221 602 ntBASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 UBE2CP3-201ENST00000502715 450 ntBASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 HMGB1P47-201ENST00000511281 589 ntBASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 NDUFB4P9-201ENST00000511646 388 ntBASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 AL121576.1-201ENST00000556055 276 ntBASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.77□□□□□ -1.81
CSPG4P5Q96PW8 AC141257.3-201ENST00000572906 215 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms