Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AL731532.2-201ENST00000623542 1953 ntBASIC5.52□□□□□ -1.53
SYNE4Q8N205 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.52□□□□□ -1.53
SYNE4Q8N205 LARP1BP1-201ENST00000506036 1359 ntBASIC5.52□□□□□ -1.53
SYNE4Q8N205 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
SYNE4Q8N205 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SYNE4Q8N205 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SYNE4Q8N205 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SYNE4Q8N205 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SYNE4Q8N205 SGO1P2-201ENST00000429458 1589 ntBASIC5.51□□□□□ -1.53
SYNE4Q8N205 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SYNE4Q8N205 MFSD8-242ENST00000641690 4199 ntBASIC5.51□□□□□ -1.53
SYNE4Q8N205 AL133268.1-201ENST00000405676 1401 ntBASIC5.51□□□□□ -1.53
SYNE4Q8N205 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SYNE4Q8N205 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SYNE4Q8N205 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SYNE4Q8N205 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.51□□□□□ -1.53
SYNE4Q8N205 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SYNE4Q8N205 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SYNE4Q8N205 MIR133A2-201ENST00000347538 102 ntBASIC5.51□□□□□ -1.53
SYNE4Q8N205 RNU6-525P-201ENST00000363685 104 ntBASIC5.51□□□□□ -1.53
SYNE4Q8N205 Y_RNA.553-201ENST00000384670 102 ntBASIC5.51□□□□□ -1.53
SYNE4Q8N205 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.51□□□□□ -1.53
SYNE4Q8N205 LINC01347-201ENST00000417964 355 ntBASIC5.51□□□□□ -1.53
SYNE4Q8N205 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.51□□□□□ -1.53
SYNE4Q8N205 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.51□□□□□ -1.53
SYNE4Q8N205 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.51□□□□□ -1.53
SYNE4Q8N205 RPS24P1-201ENST00000438550 371 ntBASIC5.51□□□□□ -1.53
SYNE4Q8N205 GTF2IP12-201ENST00000456547 356 ntBASIC5.51□□□□□ -1.53
SYNE4Q8N205 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.51□□□□□ -1.53
SYNE4Q8N205 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.51□□□□□ -1.53
SYNE4Q8N205 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.51□□□□□ -1.53
SYNE4Q8N205 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.51□□□□□ -1.53
SYNE4Q8N205 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.51□□□□□ -1.53
SYNE4Q8N205 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.51□□□□□ -1.53
SYNE4Q8N205 AC021146.8-201ENST00000507455 733 ntBASIC5.51□□□□□ -1.53
SYNE4Q8N205 AC008958.1-201ENST00000511047 682 ntBASIC5.51□□□□□ -1.53
SYNE4Q8N205 AC108120.2-201ENST00000512973 294 ntBASIC5.51□□□□□ -1.53
SYNE4Q8N205 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.51□□□□□ -1.53
SYNE4Q8N205 AC022447.1-201ENST00000515358 464 ntBASIC5.51□□□□□ -1.53
SYNE4Q8N205 RNA5SP49-201ENST00000516450 115 ntBASIC5.51□□□□□ -1.53
SYNE4Q8N205 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.51□□□□□ -1.53
SYNE4Q8N205 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.51□□□□□ -1.53
SYNE4Q8N205 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.51□□□□□ -1.53
SYNE4Q8N205 MTCYBP41-201ENST00000528913 1123 ntBASIC5.51□□□□□ -1.53
SYNE4Q8N205 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.51□□□□□ -1.53
SYNE4Q8N205 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.51□□□□□ -1.53
SYNE4Q8N205 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.51□□□□□ -1.53
SYNE4Q8N205 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC5.51□□□□□ -1.53
SYNE4Q8N205 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SYNE4Q8N205 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.51□□□□□ -1.53
SYNE4Q8N205 AL139418.1-201ENST00000613613 177 ntBASIC5.51□□□□□ -1.53
SYNE4Q8N205 AL158063.1-201ENST00000615349 536 ntBASIC5.51□□□□□ -1.53
SYNE4Q8N205 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SYNE4Q8N205 AL158062.1-201ENST00000619632 745 ntBASIC5.51□□□□□ -1.53
SYNE4Q8N205 AC018755.4-201ENST00000619715 454 ntBASIC5.51□□□□□ -1.53
SYNE4Q8N205 AL445363.3-201ENST00000623080 671 ntBASIC5.51□□□□□ -1.53
SYNE4Q8N205 AC112484.5-201ENST00000624189 228 ntBASIC5.51□□□□□ -1.53
SYNE4Q8N205 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SYNE4Q8N205 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
SYNE4Q8N205 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SYNE4Q8N205 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SYNE4Q8N205 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SYNE4Q8N205 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SYNE4Q8N205 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.51□□□□□ -1.53
SYNE4Q8N205 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SYNE4Q8N205 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.51□□□□□ -1.53
SYNE4Q8N205 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.51□□□□□ -1.53
SYNE4Q8N205 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SYNE4Q8N205 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SYNE4Q8N205 CR381670.1-201ENST00000624291 1693 ntBASIC5.5□□□□□ -1.53
SYNE4Q8N205 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SYNE4Q8N205 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SYNE4Q8N205 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SYNE4Q8N205 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SYNE4Q8N205 AL022311.1-201ENST00000623726 19416 ntBASIC5.5□□□□□ -1.53
SYNE4Q8N205 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SYNE4Q8N205 AC125336.1-201ENST00000508893 2827 ntBASIC5.5□□□□□ -1.53
SYNE4Q8N205 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.5□□□□□ -1.53
SYNE4Q8N205 NXPH1-205ENST00000602349 1953 ntBASIC5.5□□□□□ -1.53
SYNE4Q8N205 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SYNE4Q8N205 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
SYNE4Q8N205 ANKRD36P1-201ENST00000344424 659 ntBASIC5.5□□□□□ -1.53
SYNE4Q8N205 RNU6-304P-201ENST00000364855 107 ntBASIC5.5□□□□□ -1.53
SYNE4Q8N205 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SYNE4Q8N205 RNA5SP187-201ENST00000384400 119 ntBASIC5.5□□□□□ -1.53
SYNE4Q8N205 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.5□□□□□ -1.53
SYNE4Q8N205 AC097374.1-203ENST00000400783 485 ntBASIC5.5□□□□□ -1.53
SYNE4Q8N205 MTND1P23-201ENST00000416931 372 ntBASIC5.5□□□□□ -1.53
SYNE4Q8N205 AL117339.2-201ENST00000430475 180 ntBASIC5.5□□□□□ -1.53
SYNE4Q8N205 RPEP2-201ENST00000432149 701 ntBASIC5.5□□□□□ -1.53
SYNE4Q8N205 CASP3P1-201ENST00000446037 609 ntBASIC5.5□□□□□ -1.53
SYNE4Q8N205 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC5.5□□□□□ -1.53
SYNE4Q8N205 AC068724.1-201ENST00000487100 792 ntBASIC5.5□□□□□ -1.53
SYNE4Q8N205 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.5□□□□□ -1.53
SYNE4Q8N205 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SYNE4Q8N205 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SYNE4Q8N205 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.5□□□□□ -1.53
SYNE4Q8N205 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.5□□□□□ -1.53
SYNE4Q8N205 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.5□□□□□ -1.53
SYNE4Q8N205 VN1R88P-201ENST00000596787 292 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms