Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AP001148.1-201ENST00000624124 2359 ntBASIC3.24□□□□□ -1.89
LRRC28Q86X40 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
LRRC28Q86X40 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRRC28Q86X40 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRRC28Q86X40 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRRC28Q86X40 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRRC28Q86X40 RAD1P1-201ENST00000231383 813 ntBASIC3.24□□□□□ -1.89
LRRC28Q86X40 RNU6-673P-201ENST00000365084 104 ntBASIC3.24□□□□□ -1.89
LRRC28Q86X40 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.24□□□□□ -1.89
LRRC28Q86X40 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
LRRC28Q86X40 AP002088.1-201ENST00000382740 395 ntBASIC3.24□□□□□ -1.89
LRRC28Q86X40 CYCSP19-201ENST00000411715 316 ntBASIC3.24□□□□□ -1.89
LRRC28Q86X40 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LRRC28Q86X40 MTND4LP21-201ENST00000415303 295 ntBASIC3.24□□□□□ -1.89
LRRC28Q86X40 HMGB3P20-201ENST00000417997 600 ntBASIC3.24□□□□□ -1.89
LRRC28Q86X40 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.24□□□□□ -1.89
LRRC28Q86X40 TCEA1P2-201ENST00000420496 906 ntBASIC3.24□□□□□ -1.89
LRRC28Q86X40 NDUFB1P1-201ENST00000435191 180 ntBASIC3.24□□□□□ -1.89
LRRC28Q86X40 SNORA71B-202ENST00000439232 272 ntBASIC3.24□□□□□ -1.89
LRRC28Q86X40 AP000873.1-201ENST00000463987 400 ntBASIC3.24□□□□□ -1.89
LRRC28Q86X40 AC010683.1-201ENST00000473673 378 ntBASIC3.24□□□□□ -1.89
LRRC28Q86X40 TRBV8-2-201ENST00000475637 270 ntBASIC3.24□□□□□ -1.89
LRRC28Q86X40 AC020893.1-201ENST00000502452 580 ntBASIC3.24□□□□□ -1.89
LRRC28Q86X40 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.24□□□□□ -1.89
LRRC28Q86X40 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LRRC28Q86X40 AC093331.1-201ENST00000521474 169 ntBASIC3.24□□□□□ -1.89
LRRC28Q86X40 MED28P5-201ENST00000528254 438 ntBASIC3.24□□□□□ -1.89
LRRC28Q86X40 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.24□□□□□ -1.89
LRRC28Q86X40 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.24□□□□□ -1.89
LRRC28Q86X40 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.24□□□□□ -1.89
LRRC28Q86X40 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.24□□□□□ -1.89
LRRC28Q86X40 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LRRC28Q86X40 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LRRC28Q86X40 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRRC28Q86X40 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.24□□□□□ -1.89
LRRC28Q86X40 AC016252.1-201ENST00000609721 474 ntBASIC3.24□□□□□ -1.89
LRRC28Q86X40 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRRC28Q86X40 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRRC28Q86X40 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRRC28Q86X40 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.24□□□□□ -1.89
LRRC28Q86X40 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
LRRC28Q86X40 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.24□□□□□ -1.89
LRRC28Q86X40 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
LRRC28Q86X40 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LRRC28Q86X40 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LRRC28Q86X40 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LRRC28Q86X40 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.24□□□□□ -1.89
LRRC28Q86X40 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRC28Q86X40 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
LRRC28Q86X40 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LRRC28Q86X40 AP004289.2-201ENST00000444413 1457 ntBASIC3.23□□□□□ -1.89
LRRC28Q86X40 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.23□□□□□ -1.89
LRRC28Q86X40 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LRRC28Q86X40 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.23□□□□□ -1.89
LRRC28Q86X40 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRRC28Q86X40 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRRC28Q86X40 MIR554-201ENST00000384874 96 ntBASIC3.23□□□□□ -1.89
LRRC28Q86X40 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRC28Q86X40 SKINT1L-201ENST00000401057 817 ntBASIC3.23□□□□□ -1.89
LRRC28Q86X40 RN7SKP156-201ENST00000410308 342 ntBASIC3.23□□□□□ -1.89
LRRC28Q86X40 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.23□□□□□ -1.89
LRRC28Q86X40 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRC28Q86X40 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.23□□□□□ -1.89
LRRC28Q86X40 MTCO1P52-201ENST00000433928 531 ntBASIC3.23□□□□□ -1.89
LRRC28Q86X40 BX679664.1-201ENST00000434429 253 ntBASIC3.23□□□□□ -1.89
LRRC28Q86X40 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRC28Q86X40 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRC28Q86X40 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRC28Q86X40 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.23□□□□□ -1.89
LRRC28Q86X40 AC111000.5-201ENST00000506559 1178 ntBASIC3.23□□□□□ -1.89
LRRC28Q86X40 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.23□□□□□ -1.89
LRRC28Q86X40 SAP18P1-201ENST00000512058 390 ntBASIC3.23□□□□□ -1.89
LRRC28Q86X40 AP000926.4-201ENST00000527351 454 ntBASIC3.23□□□□□ -1.89
LRRC28Q86X40 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LRRC28Q86X40 AL121766.1-201ENST00000547436 487 ntBASIC3.23□□□□□ -1.89
LRRC28Q86X40 AL161713.1-201ENST00000555538 145 ntBASIC3.23□□□□□ -1.89
LRRC28Q86X40 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.23□□□□□ -1.89
LRRC28Q86X40 AC234775.3-201ENST00000564612 656 ntBASIC3.23□□□□□ -1.89
LRRC28Q86X40 AC007423.1-201ENST00000605009 627 ntBASIC3.23□□□□□ -1.89
LRRC28Q86X40 AC015849.6-201ENST00000605454 474 ntBASIC3.23□□□□□ -1.89
LRRC28Q86X40 AC005344.1-201ENST00000613391 459 ntBASIC3.23□□□□□ -1.89
LRRC28Q86X40 AL589935.2-201ENST00000616471 1231 ntBASIC3.23□□□□□ -1.89
LRRC28Q86X40 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.23□□□□□ -1.89
LRRC28Q86X40 AL356863.1-201ENST00000623378 1080 ntBASIC3.23□□□□□ -1.89
LRRC28Q86X40 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRC28Q86X40 AC073530.2-201ENST00000623987 261 ntBASIC3.23□□□□□ -1.89
LRRC28Q86X40 AC138649.5-201ENST00000637456 137 ntBASIC3.23□□□□□ -1.89
LRRC28Q86X40 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRC28Q86X40 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRC28Q86X40 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
LRRC28Q86X40 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LRRC28Q86X40 AL161912.2-201ENST00000565707 3007 ntBASIC3.22□□□□□ -1.89
LRRC28Q86X40 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
LRRC28Q86X40 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRRC28Q86X40 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
LRRC28Q86X40 OR4A15-201ENST00000314706 1035 ntBASIC3.22□□□□□ -1.89
LRRC28Q86X40 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
LRRC28Q86X40 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
LRRC28Q86X40 RNA5SP42-201ENST00000364278 115 ntBASIC3.22□□□□□ -1.89
LRRC28Q86X40 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms