Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.94□□□□□ -1.94
LSM3P62310 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.94□□□□□ -1.94
LSM3P62310 MIR5187-201ENST00000583479 76 ntBASIC2.94□□□□□ -1.94
LSM3P62310 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LSM3P62310 AC010857.1-201ENST00000606398 594 ntBASIC2.94□□□□□ -1.94
LSM3P62310 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LSM3P62310 uc_338.1-201ENST00000612113 180 ntBASIC2.94□□□□□ -1.94
LSM3P62310 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.94□□□□□ -1.94
LSM3P62310 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LSM3P62310 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LSM3P62310 AC084035.1-201ENST00000634543 607 ntBASIC2.94□□□□□ -1.94
LSM3P62310 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC2.94□□□□□ -1.94
LSM3P62310 MFSD8-233ENST00000641482 4860 ntBASIC2.94□□□□□ -1.94
LSM3P62310 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
LSM3P62310 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC2.94□□□□□ -1.94
LSM3P62310 AL353746.1-201ENST00000566293 6881 ntBASIC2.94□□□□□ -1.94
LSM3P62310 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LSM3P62310 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
LSM3P62310 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
LSM3P62310 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LSM3P62310 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
LSM3P62310 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LSM3P62310 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
LSM3P62310 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
LSM3P62310 RN7SKP123-201ENST00000410732 291 ntBASIC2.93□□□□□ -1.94
LSM3P62310 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC2.93□□□□□ -1.94
LSM3P62310 SLC4A1APP1-201ENST00000419995 602 ntBASIC2.93□□□□□ -1.94
LSM3P62310 AL390023.1-201ENST00000428836 262 ntBASIC2.93□□□□□ -1.94
LSM3P62310 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.93□□□□□ -1.94
LSM3P62310 AC092013.1-201ENST00000438795 332 ntBASIC2.93□□□□□ -1.94
LSM3P62310 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.93□□□□□ -1.94
LSM3P62310 RPL23AP62-201ENST00000463396 453 ntBASIC2.93□□□□□ -1.94
LSM3P62310 AC018635.1-201ENST00000468292 1030 ntBASIC2.93□□□□□ -1.94
LSM3P62310 AC087385.1-201ENST00000475062 312 ntBASIC2.93□□□□□ -1.94
LSM3P62310 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC2.93□□□□□ -1.94
LSM3P62310 TRAV31-201ENST00000502780 342 ntBASIC2.93□□□□□ -1.94
LSM3P62310 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC2.93□□□□□ -1.94
LSM3P62310 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.93□□□□□ -1.94
LSM3P62310 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.93□□□□□ -1.94
LSM3P62310 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC2.93□□□□□ -1.94
LSM3P62310 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.93□□□□□ -1.94
LSM3P62310 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.93□□□□□ -1.94
LSM3P62310 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.93□□□□□ -1.94
LSM3P62310 SNORA50A-202ENST00000629536 136 ntBASIC2.93□□□□□ -1.94
LSM3P62310 U6.98-201ENST00000637157 84 ntBASIC2.93□□□□□ -1.94
LSM3P62310 MAPK10-362ENST00000641864 4484 ntBASIC2.93□□□□□ -1.94
LSM3P62310 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LSM3P62310 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.93□□□□□ -1.94
LSM3P62310 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC2.93□□□□□ -1.94
LSM3P62310 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
LSM3P62310 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LSM3P62310 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.92□□□□□ -1.94
LSM3P62310 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LSM3P62310 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LSM3P62310 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LSM3P62310 SNORD9-201ENST00000362566 104 ntBASIC2.92□□□□□ -1.94
LSM3P62310 U3.15-201ENST00000365398 212 ntBASIC2.92□□□□□ -1.94
LSM3P62310 RNA5SP105-201ENST00000391123 113 ntBASIC2.92□□□□□ -1.94
LSM3P62310 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LSM3P62310 RAB9AP4-201ENST00000415230 609 ntBASIC2.92□□□□□ -1.94
LSM3P62310 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC2.92□□□□□ -1.94
LSM3P62310 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.92□□□□□ -1.94
LSM3P62310 AL133162.1-201ENST00000463228 453 ntBASIC2.92□□□□□ -1.94
LSM3P62310 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC2.92□□□□□ -1.94
LSM3P62310 AC112198.1-201ENST00000505369 1220 ntBASIC2.92□□□□□ -1.94
LSM3P62310 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.92□□□□□ -1.94
LSM3P62310 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.92□□□□□ -1.94
LSM3P62310 AC093853.1-201ENST00000515689 483 ntBASIC2.92□□□□□ -1.94
LSM3P62310 RANP9-201ENST00000519957 271 ntBASIC2.92□□□□□ -1.94
LSM3P62310 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.92□□□□□ -1.94
LSM3P62310 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.92□□□□□ -1.94
LSM3P62310 MAGOH2P-202ENST00000584384 429 ntBASIC2.92□□□□□ -1.94
LSM3P62310 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.92□□□□□ -1.94
LSM3P62310 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.92□□□□□ -1.94
LSM3P62310 AC096586.2-201ENST00000610260 441 ntBASIC2.92□□□□□ -1.94
LSM3P62310 AL354976.1-201ENST00000613843 387 ntBASIC2.92□□□□□ -1.94
LSM3P62310 AC009318.3-201ENST00000616916 503 ntBASIC2.92□□□□□ -1.94
LSM3P62310 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.92□□□□□ -1.94
LSM3P62310 SNORD39.4-201ENST00000620099 78 ntBASIC2.92□□□□□ -1.94
LSM3P62310 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC2.92□□□□□ -1.94
LSM3P62310 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.92□□□□□ -1.94
LSM3P62310 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LSM3P62310 MTND5P7-201ENST00000413558 1798 ntBASIC2.92□□□□□ -1.94
LSM3P62310 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
LSM3P62310 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
LSM3P62310 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.92□□□□□ -1.94
LSM3P62310 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.91□□□□□ -1.94
LSM3P62310 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LSM3P62310 RNU1-70P-201ENST00000362618 164 ntBASIC2.91□□□□□ -1.94
LSM3P62310 MIR105-2-201ENST00000385083 81 ntBASIC2.91□□□□□ -1.94
LSM3P62310 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LSM3P62310 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
LSM3P62310 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
LSM3P62310 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.91□□□□□ -1.94
LSM3P62310 AC012065.2-201ENST00000421295 375 ntBASIC2.91□□□□□ -1.94
LSM3P62310 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.91□□□□□ -1.94
LSM3P62310 AC009480.2-201ENST00000422916 432 ntBASIC2.91□□□□□ -1.94
LSM3P62310 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.91□□□□□ -1.94
LSM3P62310 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC2.91□□□□□ -1.94
LSM3P62310 EIF2S2P2-201ENST00000447161 982 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms