Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A1P61619 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
SEC61A1P61619 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A1P61619 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SEC61A1P61619 KPNA2P2-201ENST00000419546 1489 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 ZNF833P-201ENST00000424938 1494 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A1P61619 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.17□□□□□ -1.74
SEC61A1P61619 EOGT-210ENST00000615922 1931 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A1P61619 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SEC61A1P61619 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A1P61619 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.17□□□□□ -1.74
SEC61A1P61619 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A1P61619 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.17□□□□□ -1.74
SEC61A1P61619 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A1P61619 Y_RNA.559-201ENST00000384686 107 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 MT-TH-201ENST00000387441 69 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 SNORA26.8-201ENST00000391306 124 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A1P61619 AL031577.2-201ENST00000404133 280 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.17□□□□□ -1.74
SEC61A1P61619 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.17□□□□□ -1.74
SEC61A1P61619 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 AC234782.4-201ENST00000417646 1048 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 RBMY2KP-201ENST00000418221 992 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.17□□□□□ -1.74
SEC61A1P61619 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.17□□□□□ -1.74
SEC61A1P61619 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.17□□□□□ -1.74
SEC61A1P61619 AL360081.1-201ENST00000428299 555 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 RPL21P110-201ENST00000433345 446 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 AL353706.1-201ENST00000436728 494 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.17□□□□□ -1.74
SEC61A1P61619 PRPF38AP2-201ENST00000438179 851 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 USP9YP22-201ENST00000438971 294 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.17□□□□□ -1.74
SEC61A1P61619 AL450023.3-201ENST00000440592 271 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 OR7E125P-201ENST00000443450 846 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 AC112498.1-201ENST00000444401 332 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.17□□□□□ -1.74
SEC61A1P61619 AL591623.2-201ENST00000449978 222 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A1P61619 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.17□□□□□ -1.74
SEC61A1P61619 RPS17P2-201ENST00000461663 408 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 CCDC75P1-201ENST00000469247 791 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 RPL30P6-201ENST00000475925 342 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 RPL7P16-201ENST00000479738 738 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 RN7SL319P-201ENST00000480656 221 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 RPS27P23-201ENST00000487608 251 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.17□□□□□ -1.74
SEC61A1P61619 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.17□□□□□ -1.74
SEC61A1P61619 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A1P61619 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.17□□□□□ -1.74
SEC61A1P61619 AC010424.1-201ENST00000506336 297 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.17□□□□□ -1.74
SEC61A1P61619 AC005178.1-201ENST00000508392 440 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.17□□□□□ -1.74
SEC61A1P61619 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.17□□□□□ -1.74
SEC61A1P61619 AC109445.1-201ENST00000512356 383 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 AC008494.2-201ENST00000514544 370 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 MYL12AP1-201ENST00000518490 515 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 AC087808.1-201ENST00000520501 361 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.17□□□□□ -1.74
SEC61A1P61619 AC012339.2-201ENST00000523996 453 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.17□□□□□ -1.74
SEC61A1P61619 AP001317.1-201ENST00000531194 960 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 AC092851.1-201ENST00000535964 478 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.17□□□□□ -1.74
SEC61A1P61619 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.17□□□□□ -1.74
SEC61A1P61619 MIR4700-201ENST00000578311 74 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.17□□□□□ -1.74
SEC61A1P61619 AC011487.3-201ENST00000593607 453 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.17□□□□□ -1.74
SEC61A1P61619 WISP1-OT1-201ENST00000602893 642 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 PSMA6P4-201ENST00000603247 718 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 AL031320.1-201ENST00000604177 357 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 AL139286.2-201ENST00000606838 396 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 AC245297.2-201ENST00000610119 565 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.17□□□□□ -1.74
SEC61A1P61619 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A1P61619 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.17□□□□□ -1.74
SEC61A1P61619 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SEC61A1P61619 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.17□□□□□ -1.74
SEC61A1P61619 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A1P61619 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.17□□□□□ -1.74
SEC61A1P61619 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A1P61619 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.17□□□□□ -1.74
SEC61A1P61619 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A1P61619 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A1P61619 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A1P61619 AC005539.1-201ENST00000443768 1479 ntBASIC4.17□□□□□ -1.74
SEC61A1P61619 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A1P61619 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
SEC61A1P61619 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A1P61619 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.17□□□□□ -1.74
SEC61A1P61619 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SEC61A1P61619 AL353743.4-201ENST00000422653 1547 ntBASIC4.16□□□□□ -1.74
SEC61A1P61619 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.16□□□□□ -1.74
SEC61A1P61619 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.16□□□□□ -1.74
SEC61A1P61619 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms