Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 OR4C2P-201ENST00000530855 1064 ntBASIC4.91□□□□□ -1.62
COPB1P53618 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.91□□□□□ -1.62
COPB1P53618 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.91□□□□□ -1.62
COPB1P53618 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.91□□□□□ -1.62
COPB1P53618 RPL23AP97-201ENST00000568955 471 ntBASIC4.91□□□□□ -1.62
COPB1P53618 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.91□□□□□ -1.62
COPB1P53618 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.91□□□□□ -1.62
COPB1P53618 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.91□□□□□ -1.62
COPB1P53618 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.91□□□□□ -1.62
COPB1P53618 OR2L1P-202ENST00000641567 1023 ntBASIC4.91□□□□□ -1.62
COPB1P53618 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
COPB1P53618 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
COPB1P53618 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
COPB1P53618 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.91□□□□□ -1.62
COPB1P53618 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.91□□□□□ -1.62
COPB1P53618 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.91□□□□□ -1.62
COPB1P53618 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
COPB1P53618 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COPB1P53618 AC104118.1-201ENST00000607625 1589 ntBASIC4.91□□□□□ -1.62
COPB1P53618 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COPB1P53618 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.9□□□□□ -1.62
COPB1P53618 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
COPB1P53618 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
COPB1P53618 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.9□□□□□ -1.62
COPB1P53618 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COPB1P53618 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
COPB1P53618 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
COPB1P53618 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
COPB1P53618 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
COPB1P53618 Y_RNA.51-201ENST00000362725 102 ntBASIC4.9□□□□□ -1.63
COPB1P53618 RNU6-304P-201ENST00000364855 107 ntBASIC4.9□□□□□ -1.63
COPB1P53618 SNORA71.2-201ENST00000364941 134 ntBASIC4.9□□□□□ -1.63
COPB1P53618 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
COPB1P53618 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
COPB1P53618 MIR659-201ENST00000384963 97 ntBASIC4.9□□□□□ -1.63
COPB1P53618 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.9□□□□□ -1.63
COPB1P53618 AL590084.2-201ENST00000401481 382 ntBASIC4.9□□□□□ -1.63
COPB1P53618 GSTA8P-201ENST00000404253 637 ntBASIC4.9□□□□□ -1.63
COPB1P53618 SNORA74C-2-201ENST00000411179 201 ntBASIC4.9□□□□□ -1.63
COPB1P53618 RAB28P1-201ENST00000411517 641 ntBASIC4.9□□□□□ -1.63
COPB1P53618 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COPB1P53618 RPL26P29-201ENST00000415623 438 ntBASIC4.9□□□□□ -1.63
COPB1P53618 GAPDHP49-201ENST00000421421 961 ntBASIC4.9□□□□□ -1.63
COPB1P53618 RPL7P44-201ENST00000424827 742 ntBASIC4.9□□□□□ -1.63
COPB1P53618 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.9□□□□□ -1.63
COPB1P53618 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.9□□□□□ -1.63
COPB1P53618 AL009174.1-201ENST00000426577 416 ntBASIC4.9□□□□□ -1.63
COPB1P53618 AC073335.1-201ENST00000427776 363 ntBASIC4.9□□□□□ -1.63
COPB1P53618 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.9□□□□□ -1.63
COPB1P53618 AL589823.1-201ENST00000429577 183 ntBASIC4.9□□□□□ -1.63
COPB1P53618 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.9□□□□□ -1.63
COPB1P53618 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.9□□□□□ -1.63
COPB1P53618 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.9□□□□□ -1.63
COPB1P53618 GEMIN8P3-201ENST00000445417 720 ntBASIC4.9□□□□□ -1.63
COPB1P53618 RPL23AP43-201ENST00000446445 471 ntBASIC4.9□□□□□ -1.63
COPB1P53618 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COPB1P53618 HMGB1P16-201ENST00000447155 540 ntBASIC4.9□□□□□ -1.63
COPB1P53618 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.9□□□□□ -1.63
COPB1P53618 AC092754.2-201ENST00000463506 460 ntBASIC4.9□□□□□ -1.63
COPB1P53618 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.9□□□□□ -1.63
COPB1P53618 AC093267.1-201ENST00000489176 961 ntBASIC4.9□□□□□ -1.63
COPB1P53618 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.9□□□□□ -1.63
COPB1P53618 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COPB1P53618 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
COPB1P53618 AC015795.1-201ENST00000513669 327 ntBASIC4.9□□□□□ -1.63
COPB1P53618 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.9□□□□□ -1.63
COPB1P53618 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.9□□□□□ -1.63
COPB1P53618 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.9□□□□□ -1.63
COPB1P53618 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.9□□□□□ -1.63
COPB1P53618 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COPB1P53618 AC063949.1-201ENST00000552900 865 ntBASIC4.9□□□□□ -1.63
COPB1P53618 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.9□□□□□ -1.63
COPB1P53618 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.9□□□□□ -1.63
COPB1P53618 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.9□□□□□ -1.63
COPB1P53618 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.9□□□□□ -1.63
COPB1P53618 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.9□□□□□ -1.63
COPB1P53618 AC103987.3-201ENST00000582071 292 ntBASIC4.9□□□□□ -1.63
COPB1P53618 AC069545.1-201ENST00000605671 358 ntBASIC4.9□□□□□ -1.63
COPB1P53618 Z98200.1-201ENST00000607298 470 ntBASIC4.9□□□□□ -1.63
COPB1P53618 AC122133.1-201ENST00000613964 233 ntBASIC4.9□□□□□ -1.63
COPB1P53618 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.9□□□□□ -1.63
COPB1P53618 AC073530.2-201ENST00000623987 261 ntBASIC4.9□□□□□ -1.63
COPB1P53618 AC010608.2-201ENST00000624830 470 ntBASIC4.9□□□□□ -1.63
COPB1P53618 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.9□□□□□ -1.63
COPB1P53618 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.9□□□□□ -1.63
COPB1P53618 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
COPB1P53618 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COPB1P53618 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COPB1P53618 AC091046.3-201ENST00000631455 1574 ntBASIC4.9□□□□□ -1.63
COPB1P53618 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
COPB1P53618 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.9□□□□□ -1.63
COPB1P53618 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.89□□□□□ -1.63
COPB1P53618 OR14L1P-202ENST00000641545 3009 ntBASIC4.89□□□□□ -1.63
COPB1P53618 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COPB1P53618 RNU1-15P-201ENST00000353977 144 ntBASIC4.89□□□□□ -1.63
COPB1P53618 MIR192-201ENST00000384915 110 ntBASIC4.89□□□□□ -1.63
COPB1P53618 AL021407.1-201ENST00000404531 386 ntBASIC4.89□□□□□ -1.63
COPB1P53618 AL138880.1-201ENST00000405824 642 ntBASIC4.89□□□□□ -1.63
COPB1P53618 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.89□□□□□ -1.63
COPB1P53618 AL139421.1-201ENST00000423010 169 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms