Protein–RNA interactions for Protein: P23467

PTPRB, Receptor-type tyrosine-protein phosphatase beta, humanhuman

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRBP23467 U3.39-201ENST00000408569 239 ntBASIC3.32□□□□□ -1.88
PTPRBP23467 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.32□□□□□ -1.88
PTPRBP23467 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.32□□□□□ -1.88
PTPRBP23467 ATP5HP2-201ENST00000433885 485 ntBASIC3.32□□□□□ -1.88
PTPRBP23467 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
PTPRBP23467 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.32□□□□□ -1.88
PTPRBP23467 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.32□□□□□ -1.88
PTPRBP23467 FCF1P8-201ENST00000510322 597 ntBASIC3.32□□□□□ -1.88
PTPRBP23467 IGKV2-26-201ENST00000518305 343 ntBASIC3.32□□□□□ -1.88
PTPRBP23467 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.32□□□□□ -1.88
PTPRBP23467 AC016252.1-201ENST00000609721 474 ntBASIC3.32□□□□□ -1.88
PTPRBP23467 AL713922.2-201ENST00000619384 716 ntBASIC3.32□□□□□ -1.88
PTPRBP23467 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PTPRBP23467 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.31□□□□□ -1.88
PTPRBP23467 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
PTPRBP23467 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PTPRBP23467 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTPRBP23467 RNU1-18P-201ENST00000363062 164 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTPRBP23467 AL589994.1-201ENST00000404962 340 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 RN7SKP284-201ENST00000411002 343 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPRBP23467 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPRBP23467 RPL23AP69-201ENST00000431134 458 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPRBP23467 AL513175.1-201ENST00000431492 780 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 HMGB3P10-201ENST00000434734 572 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 MTND4LP12-201ENST00000448237 295 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPRBP23467 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPRBP23467 AC107015.1-201ENST00000466902 747 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 RN7SL585P-201ENST00000470538 280 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.31□□□□□ -1.88
PTPRBP23467 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.31□□□□□ -1.88
PTPRBP23467 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPRBP23467 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.31□□□□□ -1.88
PTPRBP23467 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.31□□□□□ -1.88
PTPRBP23467 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PTPRBP23467 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTPRBP23467 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PTPRBP23467 DDX6P1-205ENST00000441966 1436 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTPRBP23467 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
PTPRBP23467 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTPRBP23467 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PTPRBP23467 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTPRBP23467 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.31□□□□□ -1.88
PTPRBP23467 LINC01355-201ENST00000566551 5444 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 IPO8P1-201ENST00000455509 3109 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 MIR448-201ENST00000362131 111 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 HMGN1P24-201ENST00000412282 298 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 AL024507.1-201ENST00000412741 274 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.31□□□□□ -1.88
PTPRBP23467 AL160175.1-201ENST00000428124 247 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 SNRPFP2-201ENST00000440710 251 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.31□□□□□ -1.88
PTPRBP23467 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.31□□□□□ -1.88
PTPRBP23467 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPRBP23467 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPRBP23467 RPL27AP5-201ENST00000469428 449 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 KC877373.1-201ENST00000479066 408 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 RN7SKP5-201ENST00000517045 272 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.31□□□□□ -1.88
PTPRBP23467 AC092747.2-201ENST00000545069 983 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 AC006023.1-201ENST00000603944 259 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 AL713998.2-201ENST00000604538 1198 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 AC093732.2-201ENST00000607950 274 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 OR5AC4P-202ENST00000642086 985 ntBASIC3.31□□□□□ -1.88
PTPRBP23467 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTPRBP23467 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.3□□□□□ -1.88
PTPRBP23467 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTPRBP23467 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTPRBP23467 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.3□□□□□ -1.88
PTPRBP23467 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PTPRBP23467 AL645937.1-201ENST00000641739 1652 ntBASIC3.3□□□□□ -1.88
PTPRBP23467 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.3□□□□□ -1.88
PTPRBP23467 AL450326.2-201ENST00000421913 1962 ntBASIC3.3□□□□□ -1.88
PTPRBP23467 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTPRBP23467 RN7SKP111-201ENST00000410349 271 ntBASIC3.3□□□□□ -1.88
PTPRBP23467 RNU6-233P-201ENST00000410845 141 ntBASIC3.3□□□□□ -1.88
PTPRBP23467 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTPRBP23467 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.3□□□□□ -1.88
PTPRBP23467 MTND2P11-201ENST00000423638 648 ntBASIC3.3□□□□□ -1.88
PTPRBP23467 MTND6P18-201ENST00000439477 513 ntBASIC3.3□□□□□ -1.88
PTPRBP23467 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPRBP23467 TPTE2P3-201ENST00000441562 1189 ntBASIC3.3□□□□□ -1.88
PTPRBP23467 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPRBP23467 IGLVIV-53-201ENST00000520107 367 ntBASIC3.3□□□□□ -1.88
PTPRBP23467 KCTD9P6-201ENST00000522306 950 ntBASIC3.3□□□□□ -1.88
PTPRBP23467 AC090877.1-201ENST00000561418 344 ntBASIC3.3□□□□□ -1.88
PTPRBP23467 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.3□□□□□ -1.88
PTPRBP23467 AL451007.1-201ENST00000595491 289 ntBASIC3.3□□□□□ -1.88
PTPRBP23467 AC006539.2-201ENST00000601729 572 ntBASIC3.3□□□□□ -1.88
PTPRBP23467 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.3□□□□□ -1.88
PTPRBP23467 AL359715.5-201ENST00000623431 443 ntBASIC3.3□□□□□ -1.88
PTPRBP23467 BMS1P21-201ENST00000634565 365 ntBASIC3.3□□□□□ -1.88
PTPRBP23467 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
PTPRBP23467 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PTPRBP23467 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTPRBP23467 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms