Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.65□□□□□ -1.83
NCK1P16333 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.65□□□□□ -1.83
NCK1P16333 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NCK1P16333 FTH1P9-201ENST00000513251 355 ntBASIC3.65□□□□□ -1.83
NCK1P16333 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.65□□□□□ -1.83
NCK1P16333 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.65□□□□□ -1.83
NCK1P16333 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.65□□□□□ -1.83
NCK1P16333 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.65□□□□□ -1.83
NCK1P16333 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NCK1P16333 CBX3P5-201ENST00000552017 521 ntBASIC3.65□□□□□ -1.83
NCK1P16333 AL442163.2-201ENST00000553912 710 ntBASIC3.65□□□□□ -1.83
NCK1P16333 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.65□□□□□ -1.83
NCK1P16333 PSMB7P1-201ENST00000556349 514 ntBASIC3.65□□□□□ -1.83
NCK1P16333 AC104229.1-201ENST00000561364 255 ntBASIC3.65□□□□□ -1.83
NCK1P16333 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.65□□□□□ -1.83
NCK1P16333 AC005255.1-201ENST00000593748 216 ntBASIC3.65□□□□□ -1.83
NCK1P16333 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.65□□□□□ -1.83
NCK1P16333 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.65□□□□□ -1.83
NCK1P16333 Mico1.1-201ENST00000611698 204 ntBASIC3.65□□□□□ -1.83
NCK1P16333 AC100827.5-201ENST00000615883 426 ntBASIC3.65□□□□□ -1.83
NCK1P16333 C2orf27A-204ENST00000623058 969 ntBASIC3.65□□□□□ -1.83
NCK1P16333 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
NCK1P16333 MFSD8-213ENST00000641134 1327 ntBASIC3.65□□□□□ -1.83
NCK1P16333 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NCK1P16333 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NCK1P16333 LARP1BP1-201ENST00000506036 1359 ntBASIC3.64□□□□□ -1.83
NCK1P16333 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NCK1P16333 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.64□□□□□ -1.83
NCK1P16333 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NCK1P16333 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
NCK1P16333 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NCK1P16333 AC007685.1-201ENST00000329806 452 ntBASIC3.64□□□□□ -1.83
NCK1P16333 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NCK1P16333 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
NCK1P16333 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
NCK1P16333 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NCK1P16333 TPT1P2-201ENST00000413105 503 ntBASIC3.64□□□□□ -1.83
NCK1P16333 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.64□□□□□ -1.83
NCK1P16333 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.64□□□□□ -1.83
NCK1P16333 AL732292.1-201ENST00000426692 226 ntBASIC3.64□□□□□ -1.83
NCK1P16333 OR4F13P-201ENST00000428478 931 ntBASIC3.64□□□□□ -1.83
NCK1P16333 PTP4A1P3-201ENST00000433661 420 ntBASIC3.64□□□□□ -1.83
NCK1P16333 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.64□□□□□ -1.83
NCK1P16333 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.64□□□□□ -1.83
NCK1P16333 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.64□□□□□ -1.83
NCK1P16333 Z77249.1-201ENST00000444622 1175 ntBASIC3.64□□□□□ -1.83
NCK1P16333 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.64□□□□□ -1.83
NCK1P16333 AL353718.1-201ENST00000451028 517 ntBASIC3.64□□□□□ -1.83
NCK1P16333 AC098824.1-201ENST00000453565 980 ntBASIC3.64□□□□□ -1.83
NCK1P16333 snoU13.7-201ENST00000459220 104 ntBASIC3.64□□□□□ -1.83
NCK1P16333 AC011276.1-201ENST00000469688 323 ntBASIC3.64□□□□□ -1.83
NCK1P16333 PTGES3P3-201ENST00000511479 482 ntBASIC3.64□□□□□ -1.83
NCK1P16333 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.64□□□□□ -1.83
NCK1P16333 RNA5SP208-201ENST00000516156 78 ntBASIC3.64□□□□□ -1.83
NCK1P16333 RN7SKP277-201ENST00000516895 283 ntBASIC3.64□□□□□ -1.83
NCK1P16333 AC087369.1-201ENST00000520775 996 ntBASIC3.64□□□□□ -1.83
NCK1P16333 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.64□□□□□ -1.83
NCK1P16333 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.64□□□□□ -1.83
NCK1P16333 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.64□□□□□ -1.83
NCK1P16333 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.64□□□□□ -1.83
NCK1P16333 CYCSP29-201ENST00000533731 318 ntBASIC3.64□□□□□ -1.83
NCK1P16333 AC139103.1-201ENST00000534696 1030 ntBASIC3.64□□□□□ -1.83
NCK1P16333 TOMM20P2-201ENST00000540082 421 ntBASIC3.64□□□□□ -1.83
NCK1P16333 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.64□□□□□ -1.83
NCK1P16333 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NCK1P16333 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.64□□□□□ -1.83
NCK1P16333 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NCK1P16333 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.64□□□□□ -1.83
NCK1P16333 AC091167.4-201ENST00000605079 184 ntBASIC3.64□□□□□ -1.83
NCK1P16333 AL118556.2-201ENST00000614375 824 ntBASIC3.64□□□□□ -1.83
NCK1P16333 AC139713.2-214ENST00000642059 1811 ntBASIC3.64□□□□□ -1.83
NCK1P16333 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NCK1P16333 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
NCK1P16333 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NCK1P16333 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.64□□□□□ -1.83
NCK1P16333 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
NCK1P16333 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.64□□□□□ -1.83
NCK1P16333 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.63□□□□□ -1.83
NCK1P16333 AC073073.2-201ENST00000609827 2578 ntBASIC3.63□□□□□ -1.83
NCK1P16333 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.63□□□□□ -1.83
NCK1P16333 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
NCK1P16333 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NCK1P16333 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NCK1P16333 OR4K17-201ENST00000315543 1032 ntBASIC3.63□□□□□ -1.83
NCK1P16333 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NCK1P16333 MIR383-201ENST00000362257 73 ntBASIC3.63□□□□□ -1.83
NCK1P16333 RNA5SP366-201ENST00000365454 123 ntBASIC3.63□□□□□ -1.83
NCK1P16333 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.63□□□□□ -1.83
NCK1P16333 RNU6-398P-201ENST00000384143 109 ntBASIC3.63□□□□□ -1.83
NCK1P16333 MIR585-201ENST00000384887 94 ntBASIC3.63□□□□□ -1.83
NCK1P16333 AL391417.1-201ENST00000404100 426 ntBASIC3.63□□□□□ -1.83
NCK1P16333 BTBD10P2-201ENST00000404779 676 ntBASIC3.63□□□□□ -1.83
NCK1P16333 AL138878.1-201ENST00000405131 347 ntBASIC3.63□□□□□ -1.83
NCK1P16333 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.63□□□□□ -1.83
NCK1P16333 RPS15AP40-201ENST00000419621 391 ntBASIC3.63□□□□□ -1.83
NCK1P16333 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NCK1P16333 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.63□□□□□ -1.83
NCK1P16333 AC023141.6-201ENST00000429418 337 ntBASIC3.63□□□□□ -1.83
NCK1P16333 UBE2V1P1-201ENST00000430836 445 ntBASIC3.63□□□□□ -1.83
NCK1P16333 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms