Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC6P09630 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC6P09630 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC6P09630 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXC6P09630 OR5H2-201ENST00000355273 945 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HOXC6P09630 Y_RNA.318-201ENST00000365131 97 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 RNA5SP22-201ENST00000365393 109 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXC6P09630 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXC6P09630 RNU6-636P-201ENST00000384598 107 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 AC119751.3-201ENST00000399720 670 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 SKINT1L-201ENST00000401057 817 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 SNORA11.1-201ENST00000408133 129 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC6P09630 RPS3AP37-201ENST00000419176 745 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 MTND2P18-201ENST00000419962 1030 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 BX119904.4-201ENST00000424402 301 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC6P09630 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC6P09630 RSL24D1P3-201ENST00000449255 495 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC6P09630 AC010468.1-201ENST00000461022 817 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC6P09630 RPS29P19-201ENST00000479709 171 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.72□□□□□ -1.65
HOXC6P09630 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC6P09630 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXC6P09630 PAICSP4-201ENST00000517543 1253 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 AC087373.1-201ENST00000524920 491 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 NDUFS5P6-201ENST00000529136 295 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.72□□□□□ -1.65
HOXC6P09630 LRRC6P1-201ENST00000532188 885 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC6P09630 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC6P09630 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.72□□□□□ -1.65
HOXC6P09630 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXC6P09630 AC015726.1-201ENST00000602353 681 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 MTND3P19-201ENST00000603825 345 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 AC069304.3-201ENST00000603938 1084 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 AL049844.2-201ENST00000604280 628 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 SNORA51-201ENST00000606420 132 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 AC123767.1-202ENST00000620407 817 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 AL354798.1-201ENST00000622505 329 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXC6P09630 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXC6P09630 AC068620.4-201ENST00000636730 1182 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 AC090897.3-201ENST00000636973 1157 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXC6P09630 AC116667.1-201ENST00000604855 2072 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXC6P09630 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.72□□□□□ -1.65
HOXC6P09630 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC6P09630 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HOXC6P09630 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
HOXC6P09630 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
HOXC6P09630 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.71□□□□□ -1.65
HOXC6P09630 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
HOXC6P09630 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXC6P09630 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC6P09630 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
HOXC6P09630 RNU6-1214P-201ENST00000363650 109 ntBASIC4.71□□□□□ -1.66
HOXC6P09630 RPL7P27-201ENST00000403775 720 ntBASIC4.71□□□□□ -1.66
HOXC6P09630 MIR1911-201ENST00000410783 80 ntBASIC4.71□□□□□ -1.66
HOXC6P09630 CRYBB2P1-203ENST00000415709 538 ntBASIC4.71□□□□□ -1.66
HOXC6P09630 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC6P09630 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC6P09630 OR6C64P-201ENST00000419708 825 ntBASIC4.71□□□□□ -1.66
HOXC6P09630 AL513175.2-201ENST00000422071 443 ntBASIC4.71□□□□□ -1.66
HOXC6P09630 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXC6P09630 GOT2P5-201ENST00000433995 546 ntBASIC4.71□□□□□ -1.66
HOXC6P09630 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXC6P09630 THAP5P1-201ENST00000439089 262 ntBASIC4.71□□□□□ -1.66
HOXC6P09630 NOTCH2P1-201ENST00000443481 624 ntBASIC4.71□□□□□ -1.66
HOXC6P09630 RPS27AP15-201ENST00000447672 466 ntBASIC4.71□□□□□ -1.66
HOXC6P09630 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC6P09630 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC6P09630 USP9YP25-201ENST00000457708 443 ntBASIC4.71□□□□□ -1.66
HOXC6P09630 AC005410.1-202ENST00000460347 485 ntBASIC4.71□□□□□ -1.66
HOXC6P09630 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.71□□□□□ -1.66
HOXC6P09630 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXC6P09630 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC6P09630 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXC6P09630 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC6P09630 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.71□□□□□ -1.66
HOXC6P09630 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC6P09630 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
HOXC6P09630 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC6P09630 AC005255.1-201ENST00000593748 216 ntBASIC4.71□□□□□ -1.66
HOXC6P09630 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXC6P09630 AC091057.2-201ENST00000602594 792 ntBASIC4.71□□□□□ -1.66
HOXC6P09630 AL109653.1-201ENST00000603091 248 ntBASIC4.71□□□□□ -1.66
HOXC6P09630 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.71□□□□□ -1.66
HOXC6P09630 AP000676.3-201ENST00000623299 569 ntBASIC4.71□□□□□ -1.66
HOXC6P09630 AC019278.1-201ENST00000623516 479 ntBASIC4.71□□□□□ -1.66
HOXC6P09630 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXC6P09630 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXC6P09630 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXC6P09630 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.71□□□□□ -1.66
HOXC6P09630 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 153.1 ms