Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RN7SKP122-201ENST00000515923 296 ntBASIC4.04□□□□□ -1.76
PRKNO60260 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.04□□□□□ -1.76
PRKNO60260 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.04□□□□□ -1.76
PRKNO60260 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PRKNO60260 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
PRKNO60260 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.04□□□□□ -1.76
PRKNO60260 PSMB7P1-201ENST00000556349 514 ntBASIC4.04□□□□□ -1.76
PRKNO60260 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PRKNO60260 AL132657.2-201ENST00000564417 358 ntBASIC4.04□□□□□ -1.76
PRKNO60260 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PRKNO60260 MIR4666A-201ENST00000580160 79 ntBASIC4.04□□□□□ -1.76
PRKNO60260 MIR3939-201ENST00000582614 106 ntBASIC4.04□□□□□ -1.76
PRKNO60260 AC090312.2-201ENST00000582687 378 ntBASIC4.04□□□□□ -1.76
PRKNO60260 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.04□□□□□ -1.76
PRKNO60260 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
PRKNO60260 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PRKNO60260 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.04□□□□□ -1.76
PRKNO60260 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PRKNO60260 AC015908.5-201ENST00000623289 343 ntBASIC4.04□□□□□ -1.76
PRKNO60260 AC007490.1-201ENST00000624321 703 ntBASIC4.04□□□□□ -1.76
PRKNO60260 AC016717.3-201ENST00000624730 554 ntBASIC4.04□□□□□ -1.76
PRKNO60260 FP325313.1-201ENST00000638228 703 ntBASIC4.04□□□□□ -1.76
PRKNO60260 AC090971.4-201ENST00000560291 1800 ntBASIC4.04□□□□□ -1.76
PRKNO60260 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.04□□□□□ -1.76
PRKNO60260 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PRKNO60260 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PRKNO60260 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PRKNO60260 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
PRKNO60260 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
PRKNO60260 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PRKNO60260 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
PRKNO60260 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRKNO60260 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.03□□□□□ -1.76
PRKNO60260 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRKNO60260 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PRKNO60260 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
PRKNO60260 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRKNO60260 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PRKNO60260 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.03□□□□□ -1.76
PRKNO60260 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRKNO60260 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
PRKNO60260 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.03□□□□□ -1.76
PRKNO60260 Y_RNA.192-201ENST00000363977 102 ntBASIC4.03□□□□□ -1.76
PRKNO60260 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
PRKNO60260 OR6C69P-201ENST00000394268 893 ntBASIC4.03□□□□□ -1.76
PRKNO60260 AL512430.2-201ENST00000406786 339 ntBASIC4.03□□□□□ -1.76
PRKNO60260 SNORA74C-2-201ENST00000411179 201 ntBASIC4.03□□□□□ -1.76
PRKNO60260 MTND4P22-201ENST00000413116 1169 ntBASIC4.03□□□□□ -1.76
PRKNO60260 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PRKNO60260 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.03□□□□□ -1.76
PRKNO60260 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.03□□□□□ -1.76
PRKNO60260 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.03□□□□□ -1.76
PRKNO60260 GTF2IP23-201ENST00000423746 351 ntBASIC4.03□□□□□ -1.76
PRKNO60260 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.03□□□□□ -1.76
PRKNO60260 RPL23AP76-201ENST00000441860 458 ntBASIC4.03□□□□□ -1.76
PRKNO60260 Z99714.1-201ENST00000450463 807 ntBASIC4.03□□□□□ -1.76
PRKNO60260 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.03□□□□□ -1.76
PRKNO60260 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.03□□□□□ -1.76
PRKNO60260 AC005229.2-201ENST00000456995 399 ntBASIC4.03□□□□□ -1.76
PRKNO60260 RN7SL385P-201ENST00000468873 276 ntBASIC4.03□□□□□ -1.76
PRKNO60260 AC010618.1-201ENST00000469924 477 ntBASIC4.03□□□□□ -1.76
PRKNO60260 RPL23AP71-201ENST00000470966 469 ntBASIC4.03□□□□□ -1.76
PRKNO60260 GAPDHP39-201ENST00000481866 979 ntBASIC4.03□□□□□ -1.76
PRKNO60260 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.03□□□□□ -1.76
PRKNO60260 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRKNO60260 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRKNO60260 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.03□□□□□ -1.76
PRKNO60260 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.03□□□□□ -1.76
PRKNO60260 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRKNO60260 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.03□□□□□ -1.76
PRKNO60260 AC117522.2-201ENST00000510049 657 ntBASIC4.03□□□□□ -1.76
PRKNO60260 AC010486.3-201ENST00000511602 785 ntBASIC4.03□□□□□ -1.76
PRKNO60260 AC093755.1-201ENST00000512950 1023 ntBASIC4.03□□□□□ -1.76
PRKNO60260 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRKNO60260 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.03□□□□□ -1.76
PRKNO60260 PDCL2P2-201ENST00000533651 189 ntBASIC4.03□□□□□ -1.76
PRKNO60260 CYCSP29-201ENST00000533731 318 ntBASIC4.03□□□□□ -1.76
PRKNO60260 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.03□□□□□ -1.76
PRKNO60260 AC010198.2-201ENST00000550612 259 ntBASIC4.03□□□□□ -1.76
PRKNO60260 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.03□□□□□ -1.76
PRKNO60260 MIR4697-201ENST00000582977 78 ntBASIC4.03□□□□□ -1.76
PRKNO60260 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.03□□□□□ -1.76
PRKNO60260 RPL7P50-201ENST00000600588 727 ntBASIC4.03□□□□□ -1.76
PRKNO60260 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.03□□□□□ -1.76
PRKNO60260 Z94722.1-201ENST00000604328 474 ntBASIC4.03□□□□□ -1.76
PRKNO60260 DPRXP5-201ENST00000604662 539 ntBASIC4.03□□□□□ -1.76
PRKNO60260 AC080013.3-201ENST00000606839 578 ntBASIC4.03□□□□□ -1.76
PRKNO60260 AC091979.2-201ENST00000607514 214 ntBASIC4.03□□□□□ -1.76
PRKNO60260 AC131238.1-201ENST00000617135 328 ntBASIC4.03□□□□□ -1.76
PRKNO60260 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.03□□□□□ -1.76
PRKNO60260 AC007546.1-201ENST00000619452 559 ntBASIC4.03□□□□□ -1.76
PRKNO60260 AL445363.3-201ENST00000623080 671 ntBASIC4.03□□□□□ -1.76
PRKNO60260 AP000676.3-201ENST00000623299 569 ntBASIC4.03□□□□□ -1.76
PRKNO60260 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.03□□□□□ -1.76
PRKNO60260 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.03□□□□□ -1.76
PRKNO60260 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRKNO60260 AC140479.6-201ENST00000633535 357 ntBASIC4.03□□□□□ -1.76
PRKNO60260 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRKNO60260 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PRKNO60260 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms