Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RPL7P1-201ENST00000468161 747 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 AC146507.1-201ENST00000468335 354 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 RPL7P9-201ENST00000468715 747 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 AL136126.1-201ENST00000473603 402 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 RPL7P16-201ENST00000479738 738 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 RN7SL319P-201ENST00000480656 221 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 FAM172BP-201ENST00000487497 1089 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 AC073073.1-201ENST00000493920 463 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 AC108941.1-201ENST00000502853 530 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 HSPA8P13-201ENST00000523715 472 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 AC090819.1-201ENST00000523800 1111 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 EDDM3DP-201ENST00000554692 434 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 AL133457.1-201ENST00000564251 987 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 AP001180.3-201ENST00000582221 145 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 VN1R90P-201ENST00000595717 726 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 AC025588.3-201ENST00000604182 274 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 AC087783.2-201ENST00000605070 562 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 IMMP1LP1-201ENST00000605170 488 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 RNU6-88P-201ENST00000606801 100 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 FAM25E-202ENST00000608562 189 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 AC004223.4-201ENST00000612426 332 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 CU459211.1-201ENST00000635667 749 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 MIR6715B-201ENST00000637172 77 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 IRF5P1-201ENST00000504852 2164 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 OR4G11P-202ENST00000642116 1414 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 AC008758.3-201ENST00000507003 1829 ntBASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 RN7SKP103-201ENST00000363848 320 ntBASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 SNORA70.10-201ENST00000384515 134 ntBASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 PIGPP2-201ENST00000411569 458 ntBASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 BMS1P19-201ENST00000433925 393 ntBASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 AC073648.4-201ENST00000442655 781 ntBASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 ARPC3P5-201ENST00000448802 534 ntBASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 PLGLA-201ENST00000465668 449 ntBASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 AC083982.1-201ENST00000485679 344 ntBASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 AC093534.1-201ENST00000504977 132 ntBASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 BTF3P13-201ENST00000513224 490 ntBASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 HIGD1AP3-201ENST00000515857 278 ntBASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 AC021006.3-201ENST00000530771 192 ntBASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 AC007954.1-201ENST00000554198 494 ntBASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 HMGB2P1-201ENST00000591146 634 ntBASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 AC122133.1-201ENST00000613964 233 ntBASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 MIR3974-201ENST00000637126 96 ntBASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 AC007671.2-201ENST00000637344 619 ntBASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A3BPQ9Y5P4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 MTCO1P23-201ENST00000415223 1526 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AC011477.1-204ENST00000623416 1325 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms