Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 UBE2NP1-201ENST00000545592 458 ntBASIC5.14□□□□□ -1.59
SHANK2Q9UPX8 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.14□□□□□ -1.59
SHANK2Q9UPX8 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.14□□□□□ -1.59
SHANK2Q9UPX8 BNIP3P10-201ENST00000605360 577 ntBASIC5.14□□□□□ -1.59
SHANK2Q9UPX8 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHANK2Q9UPX8 KPNA2P2-201ENST00000419546 1489 ntBASIC5.14□□□□□ -1.59
SHANK2Q9UPX8 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHANK2Q9UPX8 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHANK2Q9UPX8 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHANK2Q9UPX8 FTLP6-201ENST00000355274 422 ntBASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 ARF4P3-201ENST00000397387 509 ntBASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 RNA5SP229-201ENST00000410809 99 ntBASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 AC006989.1-201ENST00000427212 131 ntBASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 CR383656.14-201ENST00000551951 406 ntBASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 AC092868.3-201ENST00000560515 784 ntBASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 BDH2P1-201ENST00000602288 736 ntBASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 AC020633.1-201ENST00000468439 2247 ntBASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 HSPE1P8-201ENST00000406997 288 ntBASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 MRPS18BP2-201ENST00000434310 759 ntBASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 AC006445.1-201ENST00000491925 405 ntBASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 AC005798.1-201ENST00000513715 387 ntBASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 AC009237.17-201ENST00000618111 748 ntBASIC5.13□□□□□ -1.59
SHANK2Q9UPX8 AC011503.2-201ENST00000594230 1500 ntBASIC5.12□□□□□ -1.59
SHANK2Q9UPX8 AC018555.1-201ENST00000567548 1980 ntBASIC5.12□□□□□ -1.59
SHANK2Q9UPX8 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SHANK2Q9UPX8 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHANK2Q9UPX8 Z83843.1-201ENST00000604070 3685 ntBASIC5.12□□□□□ -1.59
SHANK2Q9UPX8 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHANK2Q9UPX8 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHANK2Q9UPX8 AL160275.2-201ENST00000412010 394 ntBASIC5.12□□□□□ -1.59
SHANK2Q9UPX8 YWHAEP5-201ENST00000431545 765 ntBASIC5.12□□□□□ -1.59
SHANK2Q9UPX8 AC074367.1-201ENST00000438685 1125 ntBASIC5.12□□□□□ -1.59
SHANK2Q9UPX8 ATP5C1P1-201ENST00000441945 895 ntBASIC5.12□□□□□ -1.59
SHANK2Q9UPX8 AC109925.1-201ENST00000478069 331 ntBASIC5.12□□□□□ -1.59
SHANK2Q9UPX8 RPL7P38-201ENST00000488396 739 ntBASIC5.12□□□□□ -1.59
SHANK2Q9UPX8 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.12□□□□□ -1.59
SHANK2Q9UPX8 DUXAP6-201ENST00000553858 601 ntBASIC5.12□□□□□ -1.59
SHANK2Q9UPX8 AL360157.1-201ENST00000565962 87 ntBASIC5.12□□□□□ -1.59
SHANK2Q9UPX8 OR1AB1P-201ENST00000585564 761 ntBASIC5.12□□□□□ -1.59
SHANK2Q9UPX8 AC009464.1-201ENST00000615731 469 ntBASIC5.12□□□□□ -1.59
SHANK2Q9UPX8 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHANK2Q9UPX8 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHANK2Q9UPX8 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHANK2Q9UPX8 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHANK2Q9UPX8 TNPO1P3-201ENST00000436471 2662 ntBASIC5.11□□□□□ -1.59
SHANK2Q9UPX8 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
SHANK2Q9UPX8 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHANK2Q9UPX8 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.11□□□□□ -1.59
SHANK2Q9UPX8 AC005229.2-201ENST00000456995 399 ntBASIC5.11□□□□□ -1.59
SHANK2Q9UPX8 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.11□□□□□ -1.59
SHANK2Q9UPX8 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.11□□□□□ -1.59
SHANK2Q9UPX8 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.11□□□□□ -1.59
SHANK2Q9UPX8 AC006557.5-201ENST00000603126 811 ntBASIC5.11□□□□□ -1.59
SHANK2Q9UPX8 BRDTP1-201ENST00000605735 677 ntBASIC5.11□□□□□ -1.59
SHANK2Q9UPX8 AL590240.3-201ENST00000621416 943 ntBASIC5.11□□□□□ -1.59
SHANK2Q9UPX8 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHANK2Q9UPX8 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
SHANK2Q9UPX8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHANK2Q9UPX8 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHANK2Q9UPX8 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 MIR449A-201ENST00000362113 91 ntBASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 GSTA8P-201ENST00000404253 637 ntBASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 OOSP1P1-201ENST00000423265 274 ntBASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 RPS26P47-201ENST00000427219 348 ntBASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 AL353705.1-201ENST00000433468 480 ntBASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 DNAJC19P8-201ENST00000452887 259 ntBASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 RPS26P3-201ENST00000470205 348 ntBASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 AC004057.1-201ENST00000485827 348 ntBASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 AC110794.1-201ENST00000505816 425 ntBASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 AC026333.2-201ENST00000542164 106 ntBASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 AC136601.2-201ENST00000604356 474 ntBASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 MIR7106-201ENST00000612419 65 ntBASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 AL158062.1-201ENST00000619632 745 ntBASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 AC103858.2-201ENST00000621471 543 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms