Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AC104978.1-201ENST00000449387 391 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 MRPL35P4-201ENST00000453682 566 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AC108734.3-201ENST00000481241 1165 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AC104417.1-201ENST00000523974 751 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AL109766.1-201ENST00000555080 552 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AGGF1P4-201ENST00000568249 801 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 BNIP3P30-201ENST00000601184 574 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AC011374.2-201ENST00000607135 526 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AC239868.4-201ENST00000608318 671 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AP000255.1-201ENST00000610276 676 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AP001005.3-201ENST00000622049 129 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AC140113.4-201ENST00000622087 222 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 Z69908.1-201ENST00000622603 247 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AC099654.13-201ENST00000639774 207 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.71□□□□□ -1.65
EBF3Q9H4W6 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.71□□□□□ -1.65
EBF3Q9H4W6 AC139713.2-215ENST00000641428 5037 ntBASIC4.71□□□□□ -1.65
EBF3Q9H4W6 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
EBF3Q9H4W6 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 AC010300.1-201ENST00000600671 5134 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 ANKRD36P1-201ENST00000344424 659 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 Y_RNA.77-201ENST00000362962 107 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 RNU1-20P-201ENST00000363314 162 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 Y_RNA.126-201ENST00000363382 111 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 RNU4-51P-201ENST00000364206 140 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 RNU6-1263P-201ENST00000384601 106 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 RPS3AP26-201ENST00000398259 784 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 VDAC2P1-201ENST00000399358 958 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 FCF1P5-201ENST00000406490 482 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 AC092638.1-201ENST00000411966 1275 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 AC010385.1-201ENST00000412374 256 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 AC004448.2-201ENST00000422360 586 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 RPS29P17-201ENST00000430795 166 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 AC004938.1-201ENST00000438468 308 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 EEF1A1P39-201ENST00000440791 250 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 MRPL48P1-201ENST00000445390 636 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 TDGF1P1-201ENST00000445734 527 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 AC068135.1-201ENST00000446164 246 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 CALM1P2-201ENST00000452941 448 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 RN7SL303P-201ENST00000469773 251 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 AC008837.1-201ENST00000511513 412 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 RPS27AP18-201ENST00000515536 459 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 RNU6-759P-201ENST00000516740 103 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 AC018618.2-201ENST00000604770 446 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 AC010857.1-201ENST00000606398 594 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 AL354976.1-201ENST00000613843 387 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 AL603839.4-201ENST00000624658 1005 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 AL391684.1-202ENST00000641293 1636 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 AL049737.1-201ENST00000413920 1403 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 MTCO1P18-201ENST00000455518 1419 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 AL031119.1-201ENST00000404707 1879 ntBASIC4.71□□□□□ -1.66
EBF3Q9H4W6 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.71□□□□□ -1.66
EBF3Q9H4W6 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AL445487.1-201ENST00000415694 1580 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms