Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AC092184.1-201ENST00000625042 715 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AC099063.3-201ENST00000642066 185 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AC107982.1-201ENST00000507171 1300 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 PCAT14-202ENST00000627127 3935 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AC133552.1-201ENST00000569988 4007 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AL442639.1-201ENST00000625030 1899 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 RNU6-1151P-201ENST00000384684 107 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 MIR195-201ENST00000385194 87 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 MIR765-201ENST00000390226 114 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 Y_RNA.619-201ENST00000410951 90 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 RNU6-272P-201ENST00000411028 104 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 RPL7P8-201ENST00000411964 730 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 AC073850.1-201ENST00000449243 255 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 AURKAPS2-201ENST00000454983 333 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 RN7SL346P-201ENST00000491561 294 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 AC010625.1-201ENST00000511296 403 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 AC008494.2-201ENST00000514544 370 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 RNA5SP34-201ENST00000516887 130 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 AC006362.1-201ENST00000567392 174 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 AC138915.2-201ENST00000569776 97 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 ROCK1P1-201ENST00000573767 549 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 VN1R92P-201ENST00000598511 928 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 U73023.1-201ENST00000603134 700 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 AL139286.2-201ENST00000606838 396 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 AC004492.1-201ENST00000607036 742 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 BX323046.1-201ENST00000610145 535 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 uc_338.18-201ENST00000615451 175 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 AC009878.1-201ENST00000621819 340 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 HSPA8P17-201ENST00000427029 1382 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 MTND4P4-201ENST00000439033 1366 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 MTND5P24-201ENST00000438892 1767 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 IRF5P1-201ENST00000504852 2164 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 AC022031.1-201ENST00000585985 2593 ntBASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4AQ8WYN0 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 CDR1-202ENST00000625883 1485 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 MTND4P26-201ENST00000415971 1359 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 RN7SKP104-201ENST00000362605 328 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 RNU4-21P-201ENST00000362802 126 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 RNU6-492P-201ENST00000363035 104 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 RNA5SP123-201ENST00000363244 119 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 TPMTP3-201ENST00000411928 735 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 RPL23AP39-201ENST00000415533 405 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 BOLA3P4-201ENST00000418151 400 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 RBMY2QP-201ENST00000429799 1147 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 MTND4P6-201ENST00000438297 472 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 MTCO1P19-201ENST00000443487 500 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 COX6CP2-201ENST00000444980 225 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 AC022431.1-201ENST00000450941 438 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 RPL23AP35-201ENST00000451906 501 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 RN7SL177P-201ENST00000476596 299 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 RPL21P6-201ENST00000479171 504 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 RPL7P38-201ENST00000488396 739 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 RPS4XP14-201ENST00000493072 781 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms