Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 MIR6875-201ENST00000617506 72 ntBASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 RNA5SP196-201ENST00000625967 102 ntBASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 AC119674.1-212ENST00000641155 993 ntBASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 AP000553.6-201ENST00000641242 118 ntBASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 AP004289.2-201ENST00000444413 1457 ntBASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 RNU6-386P-201ENST00000362650 107 ntBASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 RNU6-283P-201ENST00000364788 107 ntBASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 RNU6-891P-201ENST00000384280 111 ntBASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 RNU6-328P-201ENST00000390887 106 ntBASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 AL591419.1-201ENST00000427423 339 ntBASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 NPM1P17-201ENST00000479221 602 ntBASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 AL161747.1-201ENST00000480068 358 ntBASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 AC092451.1-201ENST00000480211 153 ntBASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 MTCO1P30-201ENST00000515244 580 ntBASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 RN7SKP21-201ENST00000516503 220 ntBASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 AC008011.1-201ENST00000545989 227 ntBASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 TRAV15-201ENST00000556680 249 ntBASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 AC087499.8-201ENST00000578406 226 ntBASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 AC006270.2-201ENST00000578523 652 ntBASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 MIR4286-201ENST00000580651 93 ntBASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 AC053481.4-201ENST00000583164 216 ntBASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 AC015911.5-201ENST00000587076 451 ntBASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 AL354798.1-201ENST00000622505 329 ntBASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 CDRT1-208ENST00000630868 794 ntBASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 FAM91A3P-201ENST00000456826 2544 ntBASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDKL3Q8IVW4 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 AC096656.1-201ENST00000623826 1364 ntBASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 SEPT7P7-201ENST00000420492 1301 ntBASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 MIR30B-201ENST00000384850 88 ntBASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 SOD2P1-201ENST00000396543 562 ntBASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 AL391417.1-201ENST00000404100 426 ntBASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 PRELID3BP11-201ENST00000414230 479 ntBASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 TPTE2P1-204ENST00000435256 593 ntBASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 NUTF2P7-201ENST00000453086 375 ntBASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 AC022034.3-201ENST00000471393 478 ntBASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 AC007537.2-201ENST00000472093 511 ntBASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 OR5H4P-201ENST00000510851 923 ntBASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 AC006946.3-201ENST00000609791 756 ntBASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 AL732372.2-225ENST00000642124 456 ntBASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDKL3Q8IVW4 GABPAP-201ENST00000419271 1356 ntBASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 RNU6-532P-201ENST00000384318 107 ntBASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 MTND2P15-201ENST00000418575 892 ntBASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 BTF3P9-201ENST00000418784 283 ntBASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 RPL31P45-201ENST00000419532 356 ntBASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 AC006989.1-201ENST00000427212 131 ntBASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 ELOCP6-201ENST00000429066 328 ntBASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 AL365396.1-201ENST00000430854 671 ntBASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms