Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RN7SL802P-201ENST00000577858 299 ntBASIC4.32□□□□□ -1.72
LTBQ06643 MIR5699-201ENST00000578903 90 ntBASIC4.32□□□□□ -1.72
LTBQ06643 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.32□□□□□ -1.72
LTBQ06643 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.32□□□□□ -1.72
LTBQ06643 AP001542.2-201ENST00000593141 364 ntBASIC4.32□□□□□ -1.72
LTBQ06643 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.32□□□□□ -1.72
LTBQ06643 VN1R82P-201ENST00000601481 356 ntBASIC4.32□□□□□ -1.72
LTBQ06643 AC107304.1-201ENST00000604229 296 ntBASIC4.32□□□□□ -1.72
LTBQ06643 IMMP1LP1-201ENST00000605170 488 ntBASIC4.32□□□□□ -1.72
LTBQ06643 AL021997.1-201ENST00000605757 193 ntBASIC4.32□□□□□ -1.72
LTBQ06643 AC010857.1-201ENST00000606398 594 ntBASIC4.32□□□□□ -1.72
LTBQ06643 AP000238.1-201ENST00000608759 426 ntBASIC4.32□□□□□ -1.72
LTBQ06643 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LTBQ06643 AC021106.3-201ENST00000623925 531 ntBASIC4.32□□□□□ -1.72
LTBQ06643 AP003072.4-201ENST00000624580 310 ntBASIC4.32□□□□□ -1.72
LTBQ06643 MIR4278-201ENST00000636094 69 ntBASIC4.32□□□□□ -1.72
LTBQ06643 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LTBQ06643 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
LTBQ06643 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
LTBQ06643 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
LTBQ06643 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LTBQ06643 AL359922.3-201ENST00000624779 1670 ntBASIC4.32□□□□□ -1.72
LTBQ06643 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LTBQ06643 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LTBQ06643 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LTBQ06643 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LTBQ06643 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LTBQ06643 RNU1-83P-201ENST00000363426 164 ntBASIC4.31□□□□□ -1.72
LTBQ06643 RNU6-560P-201ENST00000364007 108 ntBASIC4.31□□□□□ -1.72
LTBQ06643 RNU6-707P-201ENST00000364647 95 ntBASIC4.31□□□□□ -1.72
LTBQ06643 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.31□□□□□ -1.72
LTBQ06643 OR1L1-202ENST00000373686 1083 ntBASIC4.31□□□□□ -1.72
LTBQ06643 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LTBQ06643 RNU6-1200P-201ENST00000384162 107 ntBASIC4.31□□□□□ -1.72
LTBQ06643 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LTBQ06643 SNORA11F-201ENST00000408237 128 ntBASIC4.31□□□□□ -1.72
LTBQ06643 RN7SKP263-201ENST00000411194 309 ntBASIC4.31□□□□□ -1.72
LTBQ06643 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.31□□□□□ -1.72
LTBQ06643 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.31□□□□□ -1.72
LTBQ06643 AC006366.1-201ENST00000422002 759 ntBASIC4.31□□□□□ -1.72
LTBQ06643 CHIAP3-201ENST00000423668 1133 ntBASIC4.31□□□□□ -1.72
LTBQ06643 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.31□□□□□ -1.72
LTBQ06643 AC234779.1-201ENST00000425910 285 ntBASIC4.31□□□□□ -1.72
LTBQ06643 OR2B7P-201ENST00000429302 934 ntBASIC4.31□□□□□ -1.72
LTBQ06643 AC244035.1-201ENST00000430042 390 ntBASIC4.31□□□□□ -1.72
LTBQ06643 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.31□□□□□ -1.72
LTBQ06643 ATP5F1P1-201ENST00000433775 569 ntBASIC4.31□□□□□ -1.72
LTBQ06643 AC234064.1-201ENST00000436312 247 ntBASIC4.31□□□□□ -1.72
LTBQ06643 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.31□□□□□ -1.72
LTBQ06643 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LTBQ06643 SLC25A18P1-201ENST00000449385 454 ntBASIC4.31□□□□□ -1.72
LTBQ06643 AC010733.1-201ENST00000451515 401 ntBASIC4.31□□□□□ -1.72
LTBQ06643 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.31□□□□□ -1.72
LTBQ06643 AC002553.2-201ENST00000453217 340 ntBASIC4.31□□□□□ -1.72
LTBQ06643 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.31□□□□□ -1.72
LTBQ06643 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.31□□□□□ -1.72
LTBQ06643 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.31□□□□□ -1.72
LTBQ06643 RPL23AP37-201ENST00000479658 549 ntBASIC4.31□□□□□ -1.72
LTBQ06643 AK3P4-201ENST00000504283 583 ntBASIC4.31□□□□□ -1.72
LTBQ06643 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.31□□□□□ -1.72
LTBQ06643 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.31□□□□□ -1.72
LTBQ06643 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.31□□□□□ -1.72
LTBQ06643 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.31□□□□□ -1.72
LTBQ06643 AC092747.2-201ENST00000545069 983 ntBASIC4.31□□□□□ -1.72
LTBQ06643 AL109766.1-201ENST00000555080 552 ntBASIC4.31□□□□□ -1.72
LTBQ06643 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.31□□□□□ -1.72
LTBQ06643 MIR3912-201ENST00000577566 105 ntBASIC4.31□□□□□ -1.72
LTBQ06643 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.31□□□□□ -1.72
LTBQ06643 RSL24D1P11-201ENST00000591045 491 ntBASIC4.31□□□□□ -1.72
LTBQ06643 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.31□□□□□ -1.72
LTBQ06643 AC068790.7-201ENST00000602347 528 ntBASIC4.31□□□□□ -1.72
LTBQ06643 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.31□□□□□ -1.72
LTBQ06643 AC004223.4-201ENST00000612426 332 ntBASIC4.31□□□□□ -1.72
LTBQ06643 AL158063.1-201ENST00000615349 536 ntBASIC4.31□□□□□ -1.72
LTBQ06643 AL356274.1-201ENST00000617064 410 ntBASIC4.31□□□□□ -1.72
LTBQ06643 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.31□□□□□ -1.72
LTBQ06643 AF001550.2-201ENST00000636643 217 ntBASIC4.31□□□□□ -1.72
LTBQ06643 AL392088.2-201ENST00000637607 285 ntBASIC4.31□□□□□ -1.72
LTBQ06643 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.31□□□□□ -1.72
LTBQ06643 AP005901.5-201ENST00000545779 1796 ntBASIC4.31□□□□□ -1.72
LTBQ06643 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LTBQ06643 AL445487.1-201ENST00000415694 1580 ntBASIC4.31□□□□□ -1.72
LTBQ06643 AC104118.1-201ENST00000607625 1589 ntBASIC4.31□□□□□ -1.72
LTBQ06643 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LTBQ06643 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LTBQ06643 SEC63P2-201ENST00000503863 1939 ntBASIC4.31□□□□□ -1.72
LTBQ06643 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
LTBQ06643 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LTBQ06643 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
LTBQ06643 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.3□□□□□ -1.72
LTBQ06643 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.3□□□□□ -1.72
LTBQ06643 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LTBQ06643 METTL21EP-201ENST00000298105 713 ntBASIC4.3□□□□□ -1.72
LTBQ06643 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LTBQ06643 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LTBQ06643 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LTBQ06643 OR5H15-201ENST00000383696 930 ntBASIC4.3□□□□□ -1.72
LTBQ06643 RNU4-31P-201ENST00000384211 141 ntBASIC4.3□□□□□ -1.72
LTBQ06643 RNU6-452P-201ENST00000384406 107 ntBASIC4.3□□□□□ -1.72
LTBQ06643 Y_RNA.559-201ENST00000384686 107 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms