Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
EPHB3P54753 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.58□□□□□ -1.52
EPHB3P54753 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
EPHB3P54753 AL442128.2-201ENST00000620246 1824 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 NLRP3P1-201ENST00000622303 1785 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
EPHB3P54753 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
EPHB3P54753 AC232271.1-201ENST00000602455 2715 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
EPHB3P54753 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
EPHB3P54753 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
EPHB3P54753 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.57□□□□□ -1.52
EPHB3P54753 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
EPHB3P54753 AL161909.1-201ENST00000397390 712 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.57□□□□□ -1.52
EPHB3P54753 RNU2-22P-201ENST00000411266 212 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 AC092745.2-202ENST00000411880 369 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.57□□□□□ -1.52
EPHB3P54753 USP9YP27-201ENST00000418455 438 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 AL513185.2-201ENST00000425543 193 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 AL590762.4-201ENST00000425885 253 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.57□□□□□ -1.52
EPHB3P54753 BX679664.2-201ENST00000439282 283 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 RBMY2TP-201ENST00000451162 947 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 RPL7P42-201ENST00000481005 679 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
EPHB3P54753 AC011352.3-201ENST00000505162 593 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.57□□□□□ -1.52
EPHB3P54753 AC111000.3-201ENST00000508057 576 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC5.57□□□□□ -1.52
EPHB3P54753 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.57□□□□□ -1.52
EPHB3P54753 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.57□□□□□ -1.52
EPHB3P54753 MTCO1P30-201ENST00000515244 580 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 RNU6-416P-201ENST00000516265 103 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 AC012400.1-201ENST00000518452 381 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC5.57□□□□□ -1.52
EPHB3P54753 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
EPHB3P54753 OR5AP1P-201ENST00000529730 940 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 AP003072.1-201ENST00000531740 145 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.57□□□□□ -1.52
EPHB3P54753 AC025260.1-201ENST00000548858 430 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 AC136618.2-201ENST00000575091 400 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.57□□□□□ -1.52
EPHB3P54753 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.57□□□□□ -1.52
EPHB3P54753 AL161729.3-201ENST00000603533 673 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 AL050343.2-201ENST00000607338 280 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.57□□□□□ -1.52
EPHB3P54753 AP001506.1-201ENST00000615444 211 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 MLECP1-201ENST00000615893 709 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 AC108479.2-201ENST00000617314 601 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.57□□□□□ -1.52
EPHB3P54753 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.57□□□□□ -1.52
EPHB3P54753 MTND5P42-201ENST00000637720 498 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
EPHB3P54753 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.57□□□□□ -1.52
EPHB3P54753 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
EPHB3P54753 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.57□□□□□ -1.52
EPHB3P54753 AC092747.4-201ENST00000620519 1861 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
EPHB3P54753 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
EPHB3P54753 AC114774.1-201ENST00000507410 1770 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.57□□□□□ -1.52
EPHB3P54753 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.57□□□□□ -1.52
EPHB3P54753 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
EPHB3P54753 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
EPHB3P54753 CYP1D1P-201ENST00000416662 1433 ntBASIC5.57□□□□□ -1.52
EPHB3P54753 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.56□□□□□ -1.52
EPHB3P54753 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
EPHB3P54753 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
EPHB3P54753 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
EPHB3P54753 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
EPHB3P54753 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
EPHB3P54753 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
EPHB3P54753 SCARNA15-201ENST00000607520 4325 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
EPHB3P54753 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC5.56□□□□□ -1.52
EPHB3P54753 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
EPHB3P54753 FRG1BP-201ENST00000278882 761 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 FRG1CP-201ENST00000358464 769 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 Y_RNA.142-201ENST00000363491 102 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 U3.10-201ENST00000364459 214 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 RNU6-877P-201ENST00000383868 107 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 RNU6-729P-201ENST00000384399 107 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 MIR217-201ENST00000384817 110 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 U3.23-201ENST00000391132 200 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.56□□□□□ -1.52
EPHB3P54753 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.56□□□□□ -1.52
EPHB3P54753 AL451074.3-201ENST00000437709 472 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.56□□□□□ -1.52
EPHB3P54753 AL831737.1-201ENST00000441288 271 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.56□□□□□ -1.52
EPHB3P54753 AC079168.1-201ENST00000458741 345 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.56□□□□□ -1.52
EPHB3P54753 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.56□□□□□ -1.52
EPHB3P54753 AC021678.1-201ENST00000505195 936 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 AC022447.3-201ENST00000506865 495 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 BTG4P1-201ENST00000510421 183 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 AC091912.1-201ENST00000511351 248 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 AC105914.1-201ENST00000511798 226 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms