Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AL023583.1-201ENST00000607518 1143 ntBASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 AC091905.1-201ENST00000624400 311 ntBASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCNB1IP1Q9NPC3 LARP1BP1-201ENST00000506036 1359 ntBASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 SNORA60-201ENST00000362396 134 ntBASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 RNU6-40P-201ENST00000384254 107 ntBASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 RNU2-21P-201ENST00000410368 188 ntBASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 AL035458.1-201ENST00000433096 585 ntBASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 HMGN2P21-201ENST00000447764 270 ntBASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 RPL38P1-201ENST00000460914 211 ntBASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 PPIAP15-201ENST00000479662 484 ntBASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 AC091167.1-201ENST00000492017 396 ntBASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 AC078817.1-201ENST00000492623 435 ntBASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 AC023141.12-201ENST00000512399 199 ntBASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 SNORA31.9-201ENST00000516429 84 ntBASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 RN7SKP209-201ENST00000516888 304 ntBASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 AC008562.1-201ENST00000521763 330 ntBASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 KPNA2P3-201ENST00000584190 848 ntBASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 AF230666.2-201ENST00000602328 725 ntBASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 BRDTP1-201ENST00000605735 677 ntBASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 AC011374.2-201ENST00000607135 526 ntBASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 AC103710.3-201ENST00000608157 948 ntBASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 MIR6748-201ENST00000610433 71 ntBASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 HSPA8P19-201ENST00000505359 1517 ntBASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 AC116667.1-201ENST00000604855 2072 ntBASIC3.63□□□□□ -1.83
CCNB1IP1Q9NPC3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 SNORA56-201ENST00000383966 129 ntBASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 RPL7AP73-201ENST00000413490 353 ntBASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 FO393419.3-201ENST00000428741 282 ntBASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 AC016712.1-201ENST00000431088 378 ntBASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 BMS1P19-201ENST00000433925 393 ntBASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 MTND2P21-201ENST00000436242 1042 ntBASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 NUTF2P3-201ENST00000448540 384 ntBASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 AL162151.2-201ENST00000448875 158 ntBASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 RNA5SP246-201ENST00000458909 119 ntBASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 RPL7P1-201ENST00000468161 747 ntBASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 RPL7P9-201ENST00000468715 747 ntBASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 AC092451.1-201ENST00000480211 153 ntBASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 RN7SL604P-201ENST00000492589 296 ntBASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 AC093824.1-201ENST00000508796 343 ntBASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 HPRT1P1-201ENST00000509498 657 ntBASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 SNORA31.13-201ENST00000516624 135 ntBASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 COX6B1P6-201ENST00000522347 255 ntBASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 AL390816.3-201ENST00000604527 1066 ntBASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 AC016911.1-201ENST00000613297 452 ntBASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 MLECP1-201ENST00000615893 709 ntBASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 AL139089.1-201ENST00000620372 975 ntBASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 MIR8059-201ENST00000620427 81 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms