Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 OR5BC1P-201ENST00000529327 739 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC069366.1-201ENST00000583159 838 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 PCNAP1-202ENST00000595299 752 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC068790.4-201ENST00000602474 263 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC008745.1-201ENST00000604064 271 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC025588.2-201ENST00000604851 466 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 BNIP3P4-201ENST00000604946 565 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AL138478.1-201ENST00000612252 832 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC024257.5-201ENST00000612739 531 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 uc_338.9-201ENST00000617424 182 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC139769.3-201ENST00000618383 175 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC091304.6-201ENST00000619761 202 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC022079.1-201ENST00000621546 602 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC015726.3-201ENST00000624501 418 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AL049555.1-201ENST00000562834 1933 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AC009229.4-201ENST00000623854 1947 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AC097504.1-201ENST00000515103 2415 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 OR5P1P-201ENST00000299512 925 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 RNU6-146P-201ENST00000384602 108 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 MIR513A2-201ENST00000385249 127 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 ELOCP19-201ENST00000411919 318 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 OR4K6P-201ENST00000416478 897 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AC009480.2-201ENST00000422916 432 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 DNAJC19P7-201ENST00000428811 344 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 HIGD1AP4-201ENST00000430194 280 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 TPTE2P6-202ENST00000445572 1007 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AC010469.1-201ENST00000463864 576 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 PPIAP21-201ENST00000464473 501 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AC011037.1-201ENST00000483964 558 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AC013356.1-201ENST00000489027 564 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 OR51K1P-201ENST00000510214 950 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AP001636.2-201ENST00000525517 696 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 NIFKP8-201ENST00000560500 874 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 HNRNPCP4-201ENST00000571636 900 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 MIR5096-201ENST00000583713 70 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AC008638.3-201ENST00000603341 463 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AC005191.1-201ENST00000603950 358 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AC090948.1-201ENST00000607464 549 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AC092106.3-201ENST00000611308 722 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AL021997.2-201ENST00000615674 271 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AL158163.2-201ENST00000619110 700 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AP002782.1-201ENST00000623107 614 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AP006248.2-201ENST00000623309 592 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 LINC02211-204ENST00000642024 1070 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 RNF6P1-201ENST00000444889 1784 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 AC139713.2-214ENST00000642059 1811 ntBASIC4.44□□□□□ -1.7
PCDH9Q9HC56 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDH9Q9HC56 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PCDH9Q9HC56 AC010300.1-201ENST00000600671 5134 ntBASIC4.43□□□□□ -1.7
PCDH9Q9HC56 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDH9Q9HC56 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDH9Q9HC56 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDH9Q9HC56 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PCDH9Q9HC56 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms