Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 HMGB1P38-201ENST00000490557 577 ntBASIC4.7□□□□□ -1.66
UPF2Q9HAU5 RPS27AP13-201ENST00000498403 237 ntBASIC4.7□□□□□ -1.66
UPF2Q9HAU5 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.7□□□□□ -1.66
UPF2Q9HAU5 PRELID3BP6-201ENST00000503839 571 ntBASIC4.7□□□□□ -1.66
UPF2Q9HAU5 AC069306.1-201ENST00000507006 843 ntBASIC4.7□□□□□ -1.66
UPF2Q9HAU5 AC087369.1-201ENST00000520775 996 ntBASIC4.7□□□□□ -1.66
UPF2Q9HAU5 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.7□□□□□ -1.66
UPF2Q9HAU5 MTND2P32-201ENST00000521584 1038 ntBASIC4.7□□□□□ -1.66
UPF2Q9HAU5 OR5AN2P-201ENST00000534535 896 ntBASIC4.7□□□□□ -1.66
UPF2Q9HAU5 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.7□□□□□ -1.66
UPF2Q9HAU5 AC025918.2-201ENST00000558683 763 ntBASIC4.7□□□□□ -1.66
UPF2Q9HAU5 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
UPF2Q9HAU5 AC009101.1-201ENST00000568135 242 ntBASIC4.7□□□□□ -1.66
UPF2Q9HAU5 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.7□□□□□ -1.66
UPF2Q9HAU5 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.7□□□□□ -1.66
UPF2Q9HAU5 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.7□□□□□ -1.66
UPF2Q9HAU5 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.7□□□□□ -1.66
UPF2Q9HAU5 AC119501.1-201ENST00000603646 475 ntBASIC4.7□□□□□ -1.66
UPF2Q9HAU5 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.7□□□□□ -1.66
UPF2Q9HAU5 AC006927.4-201ENST00000639187 543 ntBASIC4.7□□□□□ -1.66
UPF2Q9HAU5 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.7□□□□□ -1.66
UPF2Q9HAU5 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
UPF2Q9HAU5 PNPT1P2-201ENST00000456768 2050 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 LARP1BP1-201ENST00000506036 1359 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 MIR16-2-201ENST00000362117 81 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 RNU6-354P-201ENST00000383862 107 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 RNU6-610P-201ENST00000384264 107 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 RNU6-31P-201ENST00000384388 108 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 TAF9BP2-201ENST00000400856 499 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 RNU6-584P-201ENST00000410350 95 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 ELOCP19-201ENST00000411919 318 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 RPL23AP26-201ENST00000412728 464 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 MTCO2P23-201ENST00000425216 680 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 HIGD1AP12-201ENST00000427832 281 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 AC006994.1-201ENST00000438212 839 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 AC084198.1-201ENST00000477747 402 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 AC013356.1-201ENST00000489027 564 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 OR5H3P-201ENST00000502817 919 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 AC137768.1-201ENST00000549998 553 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 AL121576.1-201ENST00000556055 276 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 AC104229.1-201ENST00000561364 255 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 AC023825.1-201ENST00000566704 1030 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 AC011492.1-201ENST00000600023 315 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 IPO5P1-202ENST00000600039 287 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 MIR8059-201ENST00000620427 81 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 AC011944.2-201ENST00000624440 683 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 AC134882.1-201ENST00000603738 1676 ntBASIC4.69□□□□□ -1.66
UPF2Q9HAU5 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UPF2Q9HAU5 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
UPF2Q9HAU5 PWAR6-201ENST00000552334 4618 ntBASIC4.68□□□□□ -1.66
UPF2Q9HAU5 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
UPF2Q9HAU5 IGKV7-3-201ENST00000357453 298 ntBASIC4.68□□□□□ -1.66
UPF2Q9HAU5 RNA5SP509-201ENST00000364577 119 ntBASIC4.68□□□□□ -1.66
UPF2Q9HAU5 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
UPF2Q9HAU5 RNU6-481P-201ENST00000384194 107 ntBASIC4.68□□□□□ -1.66
UPF2Q9HAU5 CYB5AP4-201ENST00000396692 399 ntBASIC4.68□□□□□ -1.66
UPF2Q9HAU5 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.68□□□□□ -1.66
UPF2Q9HAU5 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.68□□□□□ -1.66
UPF2Q9HAU5 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.68□□□□□ -1.66
UPF2Q9HAU5 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.68□□□□□ -1.66
UPF2Q9HAU5 RPA2P2-201ENST00000419698 796 ntBASIC4.68□□□□□ -1.66
UPF2Q9HAU5 TCEA1P2-201ENST00000420496 906 ntBASIC4.68□□□□□ -1.66
UPF2Q9HAU5 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.68□□□□□ -1.66
UPF2Q9HAU5 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.68□□□□□ -1.66
UPF2Q9HAU5 RPS26P40-201ENST00000435209 294 ntBASIC4.68□□□□□ -1.66
UPF2Q9HAU5 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.68□□□□□ -1.66
UPF2Q9HAU5 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.68□□□□□ -1.66
UPF2Q9HAU5 UQCRHP4-201ENST00000471686 272 ntBASIC4.68□□□□□ -1.66
UPF2Q9HAU5 SETP6-201ENST00000479329 568 ntBASIC4.68□□□□□ -1.66
UPF2Q9HAU5 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.68□□□□□ -1.66
UPF2Q9HAU5 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.68□□□□□ -1.66
UPF2Q9HAU5 AC096571.1-202ENST00000506634 735 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms