Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AC095050.2-201ENST00000510748 1458 ntBASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 RPL7AP73-201ENST00000413490 353 ntBASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AC063979.1-201ENST00000415539 377 ntBASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 HIGD1AP4-201ENST00000430194 280 ntBASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AC011825.1-201ENST00000484967 388 ntBASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AC124312.4-201ENST00000605533 310 ntBASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AC073073.2-201ENST00000609827 2578 ntBASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AC093775.1-201ENST00000624154 1868 ntBASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 RNA5SP229-201ENST00000410809 99 ntBASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AC069285.2-201ENST00000440210 275 ntBASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 HMGB3P22-202ENST00000451823 572 ntBASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 Z82195.1-201ENST00000604558 398 ntBASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AL163642.2-201ENST00000604722 1019 ntBASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 AC090337.1-201ENST00000579651 2074 ntBASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 RNA5SP126-201ENST00000365092 109 ntBASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 AC106872.2-201ENST00000494303 480 ntBASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 AC069209.1-201ENST00000619282 651 ntBASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 NEAT1-202ENST00000501122 22743 ntBASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 GNG5P1-201ENST00000255500 204 ntBASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 AC093698.1-201ENST00000423843 571 ntBASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 AC099563.1-201ENST00000456086 418 ntBASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 SYT14P1-201ENST00000481459 721 ntBASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 AC027309.2-201ENST00000520566 192 ntBASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 KLKP1-201ENST00000595979 403 ntBASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 BMS1P21-201ENST00000634565 365 ntBASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 AC027281.1-201ENST00000574178 758 ntBASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 AC093732.2-201ENST00000607950 274 ntBASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 AL354760.1-201ENST00000608357 643 ntBASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 AL359757.2-201ENST00000624309 274 ntBASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC2.38□□□□□ -2.03
ALMS1Q8TCU4 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 COTL1P1-201ENST00000422309 375 ntBASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 MTND2P25-201ENST00000449028 610 ntBASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 AP000859.1-201ENST00000525536 307 ntBASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 OR1AB1P-201ENST00000585564 761 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms