Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AL139095.3-201ENST00000419672 1203 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 RPL37P1-201ENST00000432310 284 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 SDR42E1P3-201ENST00000438345 502 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 GXYLT1P1-201ENST00000446657 490 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 PPIAP3-201ENST00000450588 505 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AC096992.1-201ENST00000459808 709 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AC008379.1-201ENST00000463655 464 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AC092324.1-201ENST00000468671 324 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 RPL7L1P8-201ENST00000469911 741 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 RPL21P126-201ENST00000470049 478 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AC074386.1-201ENST00000476560 767 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 HPRT1P2-201ENST00000505250 544 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AC110792.2-201ENST00000510278 224 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AC008562.1-201ENST00000521763 330 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AP003717.3-201ENST00000544832 1180 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AC007599.1-201ENST00000568688 1174 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AC079171.1-201ENST00000568788 914 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 MIR4646-201ENST00000580775 63 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 RN7SL690P-201ENST00000582087 240 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 EIF1P6-201ENST00000600054 334 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AC008782.1-201ENST00000603386 430 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AC006213.4-201ENST00000616184 634 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AC068870.2-201ENST00000620635 389 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 CGA-206ENST00000630630 832 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 CR788268.1-201ENST00000603931 1809 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 AC109780.1-201ENST00000451768 1344 ntBASIC3.42□□□□□ -1.86
CCDC71LQ8N9Z2 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AP001148.1-201ENST00000624124 2359 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AC016716.1-201ENST00000265882 708 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 OR11H4-201ENST00000315409 1082 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 RNU6-1176P-201ENST00000390955 107 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 TMSB10P2-201ENST00000416049 131 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AC073310.1-201ENST00000423226 1033 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AL157831.1-201ENST00000426134 473 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AC008072.1-201ENST00000434254 824 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 RPS26P40-201ENST00000435209 294 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 HMGB1P45-201ENST00000435986 653 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AL096829.2-201ENST00000446582 742 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AL500522.2-201ENST00000448562 343 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AC010326.1-201ENST00000462726 602 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 RPL12P20-201ENST00000475538 479 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 UBE2CP3-201ENST00000502715 450 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AC104108.1-201ENST00000509930 412 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 RPL7L1P13-201ENST00000511702 739 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AC023141.12-201ENST00000512399 199 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 MTCO3P27-201ENST00000514397 196 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms