Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 AC241584.1-201ENST00000438469 1241 ntBASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 PCNPP2-201ENST00000441651 455 ntBASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 AC108463.1-201ENST00000450258 347 ntBASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 HMGB3P21-201ENST00000452483 547 ntBASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 RPL18AP17-201ENST00000455326 198 ntBASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 AC116337.2-201ENST00000477662 156 ntBASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 AC090686.1-201ENST00000481577 749 ntBASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 PPIAP19-201ENST00000486414 492 ntBASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 AC108078.3-201ENST00000502633 489 ntBASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 AC006499.5-201ENST00000505037 514 ntBASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 CBX3P3-201ENST00000508108 532 ntBASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 ENPP7P9-201ENST00000514456 627 ntBASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 AC005868.1-201ENST00000536421 331 ntBASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 AP001094.1-201ENST00000579805 193 ntBASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 AC017100.2-201ENST00000584628 355 ntBASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 AC015982.1-201ENST00000608113 465 ntBASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 AC239868.4-201ENST00000608318 671 ntBASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 AC099842.1-201ENST00000619919 596 ntBASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 AL590240.3-201ENST00000621416 943 ntBASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 LINC01739-205ENST00000641890 573 ntBASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.63□□□□□ -1.67
PTCHD4Q6ZW05 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 SALL4P2-201ENST00000423288 2910 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 RPL21P132-201ENST00000331267 462 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 RNU6-216P-201ENST00000363282 104 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 MTCO3P31-201ENST00000405526 789 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AL450338.1-201ENST00000407987 512 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 MIR1282-201ENST00000408865 101 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AC004022.2-201ENST00000413824 193 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 MTCYBP38-201ENST00000417160 1123 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 CYCSP46-201ENST00000423569 204 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 EI24P4-201ENST00000423683 1078 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AC093698.1-201ENST00000423843 571 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 MTCO3P30-201ENST00000426425 670 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AC010881.1-201ENST00000433830 235 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 LARP1BP3-201ENST00000437229 869 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 SNRPGP9-201ENST00000456025 225 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AL133445.1-201ENST00000467051 452 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 RN7SL346P-201ENST00000491561 294 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 RN7SL441P-201ENST00000492388 296 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 SNX5P1-201ENST00000505757 1041 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AC113430.1-201ENST00000506872 718 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AC090071.1-201ENST00000507713 644 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 MTCYBP43-201ENST00000513621 740 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 DYNLL1P4-201ENST00000549314 266 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 PSMB7P1-201ENST00000556349 514 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.62□□□□□ -1.67
PTCHD4Q6ZW05 ZNF415P1-201ENST00000582279 1166 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms