Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC58Q4VC31 ARPC3P2-201ENST00000457786 533 ntBASIC3.28□□□□□ -1.88
CCDC58Q4VC31 HMGB3P14-201ENST00000494195 599 ntBASIC3.28□□□□□ -1.88
CCDC58Q4VC31 AC005912.1-201ENST00000495392 255 ntBASIC3.28□□□□□ -1.88
CCDC58Q4VC31 AC231760.1-201ENST00000498002 260 ntBASIC3.28□□□□□ -1.88
CCDC58Q4VC31 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
CCDC58Q4VC31 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC58Q4VC31 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC58Q4VC31 AC068657.1-201ENST00000520807 306 ntBASIC3.28□□□□□ -1.88
CCDC58Q4VC31 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CCDC58Q4VC31 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.28□□□□□ -1.88
CCDC58Q4VC31 OR5AP1P-201ENST00000529730 940 ntBASIC3.28□□□□□ -1.88
CCDC58Q4VC31 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC58Q4VC31 AC137768.1-201ENST00000549998 553 ntBASIC3.28□□□□□ -1.88
CCDC58Q4VC31 TGIF1P1-201ENST00000558095 802 ntBASIC3.28□□□□□ -1.88
CCDC58Q4VC31 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC58Q4VC31 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC58Q4VC31 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.28□□□□□ -1.88
CCDC58Q4VC31 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC58Q4VC31 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC58Q4VC31 AL445567.2-201ENST00000618935 498 ntBASIC3.28□□□□□ -1.88
CCDC58Q4VC31 AC079684.1-201ENST00000621405 437 ntBASIC3.28□□□□□ -1.88
CCDC58Q4VC31 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
CCDC58Q4VC31 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC58Q4VC31 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC58Q4VC31 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC58Q4VC31 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC58Q4VC31 RNA5SP189-201ENST00000364920 115 ntBASIC3.27□□□□□ -1.89
CCDC58Q4VC31 U3.22-201ENST00000391120 215 ntBASIC3.27□□□□□ -1.89
CCDC58Q4VC31 AL136116.1-201ENST00000403591 381 ntBASIC3.27□□□□□ -1.89
CCDC58Q4VC31 RNU4-6P-201ENST00000410804 122 ntBASIC3.27□□□□□ -1.89
CCDC58Q4VC31 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC58Q4VC31 SAGE2P-201ENST00000420011 2126 ntBASIC3.27□□□□□ -1.89
CCDC58Q4VC31 AP000907.1-201ENST00000428428 510 ntBASIC3.27□□□□□ -1.89
CCDC58Q4VC31 MRPS18BP2-201ENST00000434310 759 ntBASIC3.27□□□□□ -1.89
CCDC58Q4VC31 NDUFB1P1-201ENST00000435191 180 ntBASIC3.27□□□□□ -1.89
CCDC58Q4VC31 RPS27P5-201ENST00000444247 244 ntBASIC3.27□□□□□ -1.89
CCDC58Q4VC31 SETD6P1-201ENST00000444575 317 ntBASIC3.27□□□□□ -1.89
CCDC58Q4VC31 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.27□□□□□ -1.89
CCDC58Q4VC31 CYCSP53-201ENST00000455540 265 ntBASIC3.27□□□□□ -1.89
CCDC58Q4VC31 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC58Q4VC31 AC108860.1-201ENST00000484521 383 ntBASIC3.27□□□□□ -1.89
CCDC58Q4VC31 AC023050.1-201ENST00000498198 304 ntBASIC3.27□□□□□ -1.89
CCDC58Q4VC31 HMGB3P15-201ENST00000507326 574 ntBASIC3.27□□□□□ -1.89
CCDC58Q4VC31 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC58Q4VC31 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC58Q4VC31 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.27□□□□□ -1.89
CCDC58Q4VC31 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC58Q4VC31 AL163153.1-201ENST00000554223 283 ntBASIC3.27□□□□□ -1.89
CCDC58Q4VC31 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.27□□□□□ -1.89
CCDC58Q4VC31 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC58Q4VC31 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.27□□□□□ -1.89
CCDC58Q4VC31 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC58Q4VC31 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC58Q4VC31 AC024940.4-201ENST00000605507 246 ntBASIC3.27□□□□□ -1.89
CCDC58Q4VC31 AL451074.6-201ENST00000608512 729 ntBASIC3.27□□□□□ -1.89
CCDC58Q4VC31 AC004832.5-201ENST00000608677 401 ntBASIC3.27□□□□□ -1.89
CCDC58Q4VC31 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC58Q4VC31 Mico1.1-201ENST00000611698 204 ntBASIC3.27□□□□□ -1.89
CCDC58Q4VC31 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC58Q4VC31 OR52H1-202ENST00000641796 1061 ntBASIC3.27□□□□□ -1.89
CCDC58Q4VC31 AC117529.2-201ENST00000512159 2068 ntBASIC3.27□□□□□ -1.89
CCDC58Q4VC31 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC58Q4VC31 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC58Q4VC31 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
CCDC58Q4VC31 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC58Q4VC31 AL118496.1-201ENST00000440201 1812 ntBASIC3.26□□□□□ -1.89
CCDC58Q4VC31 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC58Q4VC31 RNU1-75P-201ENST00000347264 129 ntBASIC3.26□□□□□ -1.89
CCDC58Q4VC31 RNA5SP42-201ENST00000364278 115 ntBASIC3.26□□□□□ -1.89
CCDC58Q4VC31 RNA5SP130-201ENST00000364431 114 ntBASIC3.26□□□□□ -1.89
CCDC58Q4VC31 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CCDC58Q4VC31 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CCDC58Q4VC31 AL034403.1-201ENST00000399414 885 ntBASIC3.26□□□□□ -1.89
CCDC58Q4VC31 AC126124.2-201ENST00000413542 321 ntBASIC3.26□□□□□ -1.89
CCDC58Q4VC31 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC58Q4VC31 AC068287.1-201ENST00000430283 295 ntBASIC3.26□□□□□ -1.89
CCDC58Q4VC31 AL158071.1-201ENST00000430315 461 ntBASIC3.26□□□□□ -1.89
CCDC58Q4VC31 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC58Q4VC31 RPL23AP22-201ENST00000437556 453 ntBASIC3.26□□□□□ -1.89
CCDC58Q4VC31 FTH1P1-201ENST00000437933 532 ntBASIC3.26□□□□□ -1.89
CCDC58Q4VC31 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC58Q4VC31 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC58Q4VC31 CYCSP42-201ENST00000450823 238 ntBASIC3.26□□□□□ -1.89
CCDC58Q4VC31 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC58Q4VC31 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC58Q4VC31 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC58Q4VC31 AC022034.3-201ENST00000471393 478 ntBASIC3.26□□□□□ -1.89
CCDC58Q4VC31 RPS29P22-201ENST00000472363 168 ntBASIC3.26□□□□□ -1.89
CCDC58Q4VC31 AC093663.1-201ENST00000497190 394 ntBASIC3.26□□□□□ -1.89
CCDC58Q4VC31 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC58Q4VC31 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC58Q4VC31 TMEM248P1-201ENST00000510579 951 ntBASIC3.26□□□□□ -1.89
CCDC58Q4VC31 AC108471.1-201ENST00000513977 287 ntBASIC3.26□□□□□ -1.89
CCDC58Q4VC31 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC58Q4VC31 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.26□□□□□ -1.89
CCDC58Q4VC31 AC027281.1-201ENST00000574178 758 ntBASIC3.26□□□□□ -1.89
CCDC58Q4VC31 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC58Q4VC31 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC58Q4VC31 MIR3138-201ENST00000585238 82 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms