Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.43□□□□□ -1.7
GABPAQ06546 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.43□□□□□ -1.7
GABPAQ06546 AL451050.1-201ENST00000450126 415 ntBASIC4.43□□□□□ -1.7
GABPAQ06546 HMGB1P26-201ENST00000452520 628 ntBASIC4.43□□□□□ -1.7
GABPAQ06546 RPL23AP23-201ENST00000452590 471 ntBASIC4.43□□□□□ -1.7
GABPAQ06546 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.43□□□□□ -1.7
GABPAQ06546 AL354710.1-201ENST00000453641 246 ntBASIC4.43□□□□□ -1.7
GABPAQ06546 snoU13.22-201ENST00000459428 104 ntBASIC4.43□□□□□ -1.7
GABPAQ06546 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
GABPAQ06546 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.43□□□□□ -1.7
GABPAQ06546 AC106707.2-201ENST00000484182 374 ntBASIC4.43□□□□□ -1.7
GABPAQ06546 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.43□□□□□ -1.7
GABPAQ06546 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
GABPAQ06546 AC025459.1-201ENST00000504072 156 ntBASIC4.43□□□□□ -1.7
GABPAQ06546 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.43□□□□□ -1.7
GABPAQ06546 RNU6-1102P-201ENST00000516149 96 ntBASIC4.43□□□□□ -1.7
GABPAQ06546 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.43□□□□□ -1.7
GABPAQ06546 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.43□□□□□ -1.7
GABPAQ06546 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.43□□□□□ -1.7
GABPAQ06546 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.43□□□□□ -1.7
GABPAQ06546 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.43□□□□□ -1.7
GABPAQ06546 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.43□□□□□ -1.7
GABPAQ06546 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.43□□□□□ -1.7
GABPAQ06546 AL354760.1-201ENST00000608357 643 ntBASIC4.43□□□□□ -1.7
GABPAQ06546 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.43□□□□□ -1.7
GABPAQ06546 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.43□□□□□ -1.7
GABPAQ06546 AC067931.1-201ENST00000624190 671 ntBASIC4.43□□□□□ -1.7
GABPAQ06546 AC020978.9-201ENST00000624380 1141 ntBASIC4.43□□□□□ -1.7
GABPAQ06546 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.43□□□□□ -1.7
GABPAQ06546 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
GABPAQ06546 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
GABPAQ06546 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.43□□□□□ -1.7
GABPAQ06546 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
GABPAQ06546 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.42□□□□□ -1.7
GABPAQ06546 MIR142-201ENST00000384835 87 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 ATP5F1P4-201ENST00000397288 746 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
GABPAQ06546 RNU4-74P-201ENST00000411280 161 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 XKRYP4-201ENST00000414395 483 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.42□□□□□ -1.7
GABPAQ06546 OR2X1P-201ENST00000421144 687 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 BX119904.1-201ENST00000432026 348 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 MTCO1P52-201ENST00000433928 531 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 ELOCP18-201ENST00000434209 337 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 CYCSP43-201ENST00000438233 310 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.42□□□□□ -1.7
GABPAQ06546 PDSS1P2-201ENST00000449397 678 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 XKRYP5-201ENST00000449659 483 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 CLIC4P1-201ENST00000453177 535 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.42□□□□□ -1.7
GABPAQ06546 AC005726.1-201ENST00000494679 427 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 AC104619.4-201ENST00000510773 249 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.42□□□□□ -1.7
GABPAQ06546 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.42□□□□□ -1.7
GABPAQ06546 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.42□□□□□ -1.7
GABPAQ06546 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.42□□□□□ -1.7
GABPAQ06546 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.42□□□□□ -1.7
GABPAQ06546 AC079148.1-201ENST00000565944 819 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 MIR548Y-201ENST00000582739 110 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 MIR3922-201ENST00000585192 84 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.42□□□□□ -1.7
GABPAQ06546 BNIP3P22-201ENST00000593399 556 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 ZNF92P2-201ENST00000600543 1059 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 MRPS35P3-201ENST00000603189 709 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 AL512506.1-201ENST00000613918 449 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 AC004777.1-201ENST00000624317 287 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 AL356121.2-201ENST00000624715 780 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 AC119674.1-207ENST00000641355 633 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
GABPAQ06546 MAPK10-253ENST00000641010 4072 ntBASIC4.42□□□□□ -1.7
GABPAQ06546 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
GABPAQ06546 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
GABPAQ06546 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
GABPAQ06546 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.42□□□□□ -1.7
GABPAQ06546 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
GABPAQ06546 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
GABPAQ06546 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
GABPAQ06546 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.41□□□□□ -1.7
GABPAQ06546 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GABPAQ06546 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.41□□□□□ -1.7
GABPAQ06546 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
GABPAQ06546 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GABPAQ06546 AC005332.5-201ENST00000591222 2919 ntBASIC4.41□□□□□ -1.7
GABPAQ06546 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
GABPAQ06546 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GABPAQ06546 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.41□□□□□ -1.7
GABPAQ06546 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
GABPAQ06546 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.41□□□□□ -1.7
GABPAQ06546 RNU6-178P-201ENST00000384631 104 ntBASIC4.41□□□□□ -1.7
GABPAQ06546 RNA5SP306-201ENST00000411087 107 ntBASIC4.41□□□□□ -1.7
GABPAQ06546 TATDN1P1-201ENST00000414123 891 ntBASIC4.41□□□□□ -1.7
GABPAQ06546 AC073136.2-201ENST00000417282 849 ntBASIC4.41□□□□□ -1.7
GABPAQ06546 MTCO3P21-201ENST00000430791 643 ntBASIC4.41□□□□□ -1.7
GABPAQ06546 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.41□□□□□ -1.7
GABPAQ06546 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.41□□□□□ -1.7
GABPAQ06546 AC099063.2-201ENST00000446360 662 ntBASIC4.41□□□□□ -1.7
GABPAQ06546 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.41□□□□□ -1.7
GABPAQ06546 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.41□□□□□ -1.7
GABPAQ06546 RPL23AP73-201ENST00000492507 471 ntBASIC4.41□□□□□ -1.7
GABPAQ06546 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms