Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HIST1H3AP68431 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.24□□□□□ -1.89
HIST1H3AP68431 AC020910.2-201ENST00000603635 610 ntBASIC3.24□□□□□ -1.89
HIST1H3AP68431 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HIST1H3AP68431 AC103710.3-201ENST00000608157 948 ntBASIC3.24□□□□□ -1.89
HIST1H3AP68431 AC005344.1-201ENST00000613391 459 ntBASIC3.24□□□□□ -1.89
HIST1H3AP68431 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HIST1H3AP68431 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HIST1H3AP68431 AC020978.9-201ENST00000624380 1141 ntBASIC3.24□□□□□ -1.89
HIST1H3AP68431 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.24□□□□□ -1.89
HIST1H3AP68431 CDRT1-208ENST00000630868 794 ntBASIC3.24□□□□□ -1.89
HIST1H3AP68431 AC138649.5-201ENST00000637456 137 ntBASIC3.24□□□□□ -1.89
HIST1H3AP68431 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
HIST1H3AP68431 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HIST1H3AP68431 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HIST1H3AP68431 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.24□□□□□ -1.89
HIST1H3AP68431 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.24□□□□□ -1.89
HIST1H3AP68431 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HIST1H3AP68431 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
HIST1H3AP68431 CEP170P1-201ENST00000502249 4587 ntBASIC3.24□□□□□ -1.89
HIST1H3AP68431 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HIST1H3AP68431 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HIST1H3AP68431 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HIST1H3AP68431 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
HIST1H3AP68431 AC025125.1-201ENST00000624743 1922 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
HIST1H3AP68431 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
HIST1H3AP68431 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
HIST1H3AP68431 AL391417.1-201ENST00000404100 426 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 RAB28P1-201ENST00000411517 641 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 PRELID3BP11-201ENST00000414230 479 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 AC009237.5-201ENST00000414271 501 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 TCEA1P4-201ENST00000415066 844 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 AC127526.1-201ENST00000417526 366 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 HMGB3P20-201ENST00000417997 600 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 ELOCP6-201ENST00000429066 328 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.23□□□□□ -1.89
HIST1H3AP68431 MTCO1P52-201ENST00000433928 531 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 AL138799.3-201ENST00000438968 350 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.23□□□□□ -1.89
HIST1H3AP68431 CEACAMP4-201ENST00000457676 421 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 ELOCP12-201ENST00000458706 328 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 RNU7-27P-201ENST00000459281 62 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 RPL23AP62-201ENST00000463396 453 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.23□□□□□ -1.89
HIST1H3AP68431 AP001086.1-201ENST00000494882 321 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.23□□□□□ -1.89
HIST1H3AP68431 OR5H4P-201ENST00000510851 923 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.23□□□□□ -1.89
HIST1H3AP68431 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.23□□□□□ -1.89
HIST1H3AP68431 RN7SKP141-201ENST00000516167 338 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.23□□□□□ -1.89
HIST1H3AP68431 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.23□□□□□ -1.89
HIST1H3AP68431 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.23□□□□□ -1.89
HIST1H3AP68431 AGGF1P6-201ENST00000569213 976 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 MIR5047-201ENST00000579212 100 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HIST1H3AP68431 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.23□□□□□ -1.89
HIST1H3AP68431 AC119501.1-201ENST00000603646 475 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 AC067959.1-201ENST00000604334 379 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 AP000553.6-201ENST00000641242 118 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.23□□□□□ -1.89
HIST1H3AP68431 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
HIST1H3AP68431 AC096656.1-201ENST00000623826 1364 ntBASIC3.23□□□□□ -1.89
HIST1H3AP68431 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
HIST1H3AP68431 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HIST1H3AP68431 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HIST1H3AP68431 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HIST1H3AP68431 AP004289.2-201ENST00000444413 1457 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.22□□□□□ -1.89
HIST1H3AP68431 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.22□□□□□ -1.89
HIST1H3AP68431 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HIST1H3AP68431 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
HIST1H3AP68431 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HIST1H3AP68431 SAGE2P-201ENST00000420011 2126 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 RNU6-283P-201ENST00000364788 107 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.22□□□□□ -1.89
HIST1H3AP68431 AC013404.1-201ENST00000413068 249 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.22□□□□□ -1.89
HIST1H3AP68431 AC114814.2-201ENST00000419195 485 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 OR4F13P-201ENST00000428478 931 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.22□□□□□ -1.89
HIST1H3AP68431 AC091390.1-201ENST00000433904 331 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.22□□□□□ -1.89
HIST1H3AP68431 MTCYBP29-201ENST00000436327 1006 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.22□□□□□ -1.89
HIST1H3AP68431 AL645931.1-201ENST00000439737 410 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 CCRL1P1-201ENST00000449542 1053 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 RPS20P32-201ENST00000456044 356 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 RPL23AP12-201ENST00000467573 473 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 AC103987.1-201ENST00000473394 348 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.22□□□□□ -1.89
HIST1H3AP68431 RPL7P47-201ENST00000497299 556 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 TRAV31-201ENST00000502780 342 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 AC093853.1-201ENST00000515689 483 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 RNU6-579P-201ENST00000516879 102 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 AC008011.1-201ENST00000545989 227 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 OR4U1P-201ENST00000554958 912 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 AC099489.2-201ENST00000574976 260 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 MIR3160-1-201ENST00000577972 85 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms