Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 USP8P1-201ENST00000494673 3183 ntBASIC3.19□□□□□ -1.9
POLR2JP52435 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
POLR2JP52435 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
POLR2JP52435 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
POLR2JP52435 SNORA62.2-201ENST00000364672 152 ntBASIC3.19□□□□□ -1.9
POLR2JP52435 RNA5SP44-201ENST00000410446 133 ntBASIC3.19□□□□□ -1.9
POLR2JP52435 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
POLR2JP52435 HMGB3P23-201ENST00000414981 585 ntBASIC3.19□□□□□ -1.9
POLR2JP52435 AC009302.1-201ENST00000417147 390 ntBASIC3.19□□□□□ -1.9
POLR2JP52435 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.19□□□□□ -1.9
POLR2JP52435 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.19□□□□□ -1.9
POLR2JP52435 CYCSP4-201ENST00000429682 331 ntBASIC3.19□□□□□ -1.9
POLR2JP52435 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.19□□□□□ -1.9
POLR2JP52435 CST9LP2-201ENST00000437612 320 ntBASIC3.19□□□□□ -1.9
POLR2JP52435 RPS15AP29-201ENST00000445539 400 ntBASIC3.19□□□□□ -1.9
POLR2JP52435 Z99127.3-201ENST00000448158 395 ntBASIC3.19□□□□□ -1.9
POLR2JP52435 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.19□□□□□ -1.9
POLR2JP52435 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.19□□□□□ -1.9
POLR2JP52435 RNU1-143P-201ENST00000516296 146 ntBASIC3.19□□□□□ -1.9
POLR2JP52435 SCARNA20.6-201ENST00000517251 106 ntBASIC3.19□□□□□ -1.9
POLR2JP52435 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.19□□□□□ -1.9
POLR2JP52435 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.19□□□□□ -1.9
POLR2JP52435 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.19□□□□□ -1.9
POLR2JP52435 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.19□□□□□ -1.9
POLR2JP52435 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.19□□□□□ -1.9
POLR2JP52435 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
POLR2JP52435 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.19□□□□□ -1.9
POLR2JP52435 AL451086.1-201ENST00000605596 223 ntBASIC3.19□□□□□ -1.9
POLR2JP52435 U1.23-201ENST00000610293 146 ntBASIC3.19□□□□□ -1.9
POLR2JP52435 MIR378J-201ENST00000611988 109 ntBASIC3.19□□□□□ -1.9
POLR2JP52435 AL450489.1-201ENST00000612071 468 ntBASIC3.19□□□□□ -1.9
POLR2JP52435 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.19□□□□□ -1.9
POLR2JP52435 RNU1-68P-201ENST00000615382 146 ntBASIC3.19□□□□□ -1.9
POLR2JP52435 AL356321.1-201ENST00000621360 228 ntBASIC3.19□□□□□ -1.9
POLR2JP52435 U1.39-201ENST00000621562 146 ntBASIC3.19□□□□□ -1.9
POLR2JP52435 ELL2P4-201ENST00000446870 1376 ntBASIC3.19□□□□□ -1.9
POLR2JP52435 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.19□□□□□ -1.9
POLR2JP52435 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
POLR2JP52435 AL592494.2-201ENST00000425455 1548 ntBASIC3.19□□□□□ -1.9
POLR2JP52435 DDX6P1-205ENST00000441966 1436 ntBASIC3.19□□□□□ -1.9
POLR2JP52435 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
POLR2JP52435 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.18□□□□□ -1.9
POLR2JP52435 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
POLR2JP52435 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.18□□□□□ -1.9
POLR2JP52435 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.18□□□□□ -1.9
POLR2JP52435 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
POLR2JP52435 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
POLR2JP52435 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
POLR2JP52435 MIR148B-201ENST00000362252 99 ntBASIC3.18□□□□□ -1.9
POLR2JP52435 SNORA70.2-201ENST00000364506 135 ntBASIC3.18□□□□□ -1.9
POLR2JP52435 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
POLR2JP52435 RN7SKP111-201ENST00000410349 271 ntBASIC3.18□□□□□ -1.9
POLR2JP52435 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
POLR2JP52435 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
POLR2JP52435 AC017083.1-201ENST00000428093 483 ntBASIC3.18□□□□□ -1.9
POLR2JP52435 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR2JP52435 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
POLR2JP52435 AC073387.1-201ENST00000453261 709 ntBASIC3.18□□□□□ -1.9
POLR2JP52435 AL136097.1-201ENST00000456945 913 ntBASIC3.18□□□□□ -1.9
POLR2JP52435 AC007688.1-201ENST00000475592 759 ntBASIC3.18□□□□□ -1.9
POLR2JP52435 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR2JP52435 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
POLR2JP52435 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR2JP52435 RNA5SP217-201ENST00000515959 91 ntBASIC3.18□□□□□ -1.9
POLR2JP52435 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.18□□□□□ -1.9
POLR2JP52435 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR2JP52435 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.18□□□□□ -1.9
POLR2JP52435 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.18□□□□□ -1.9
POLR2JP52435 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR2JP52435 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR2JP52435 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR2JP52435 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR2JP52435 AC122134.1-201ENST00000565664 1104 ntBASIC3.18□□□□□ -1.9
POLR2JP52435 MIR4700-201ENST00000578311 74 ntBASIC3.18□□□□□ -1.9
POLR2JP52435 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR2JP52435 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.18□□□□□ -1.9
POLR2JP52435 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.18□□□□□ -1.9
POLR2JP52435 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.18□□□□□ -1.9
POLR2JP52435 AC099676.1-201ENST00000608886 657 ntBASIC3.18□□□□□ -1.9
POLR2JP52435 uc_338.1-201ENST00000612113 180 ntBASIC3.18□□□□□ -1.9
POLR2JP52435 AC018816.2-201ENST00000621460 353 ntBASIC3.18□□□□□ -1.9
POLR2JP52435 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.18□□□□□ -1.9
POLR2JP52435 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
POLR2JP52435 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
POLR2JP52435 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
POLR2JP52435 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
POLR2JP52435 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.17□□□□□ -1.9
POLR2JP52435 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.17□□□□□ -1.9
POLR2JP52435 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.17□□□□□ -1.9
POLR2JP52435 RPL21P17-201ENST00000397467 475 ntBASIC3.17□□□□□ -1.9
POLR2JP52435 NCSTNP1-201ENST00000406229 144 ntBASIC3.17□□□□□ -1.9
POLR2JP52435 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.17□□□□□ -1.9
POLR2JP52435 RPL32P35-201ENST00000415214 394 ntBASIC3.17□□□□□ -1.9
POLR2JP52435 CRYBB2P1-203ENST00000415709 538 ntBASIC3.17□□□□□ -1.9
POLR2JP52435 FTH1P6-201ENST00000430768 320 ntBASIC3.17□□□□□ -1.9
POLR2JP52435 AL035458.1-201ENST00000433096 585 ntBASIC3.17□□□□□ -1.9
POLR2JP52435 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.17□□□□□ -1.9
POLR2JP52435 NOTCH2P1-201ENST00000443481 624 ntBASIC3.17□□□□□ -1.9
POLR2JP52435 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.17□□□□□ -1.9
POLR2JP52435 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms