Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
USP11P51784 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
USP11P51784 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC6.22□□□□□ -1.41
USP11P51784 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.22□□□□□ -1.41
USP11P51784 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.22□□□□□ -1.41
USP11P51784 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.22□□□□□ -1.41
USP11P51784 RNU6-845P-201ENST00000362578 103 ntBASIC6.22□□□□□ -1.41
USP11P51784 Y_RNA.132-201ENST00000363421 102 ntBASIC6.22□□□□□ -1.41
USP11P51784 SNORD81.2-201ENST00000365153 76 ntBASIC6.22□□□□□ -1.41
USP11P51784 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.22□□□□□ -1.41
USP11P51784 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
USP11P51784 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC6.22□□□□□ -1.41
USP11P51784 RSU1P3-201ENST00000412878 835 ntBASIC6.22□□□□□ -1.41
USP11P51784 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC6.22□□□□□ -1.41
USP11P51784 OR51A3P-201ENST00000413596 924 ntBASIC6.22□□□□□ -1.41
USP11P51784 MTCO3P12-201ENST00000416718 547 ntBASIC6.22□□□□□ -1.41
USP11P51784 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC6.22□□□□□ -1.41
USP11P51784 AC093084.1-201ENST00000424233 687 ntBASIC6.22□□□□□ -1.41
USP11P51784 RPL12P17-201ENST00000432393 498 ntBASIC6.22□□□□□ -1.41
USP11P51784 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.22□□□□□ -1.41
USP11P51784 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.22□□□□□ -1.41
USP11P51784 SNRPGP6-201ENST00000451124 220 ntBASIC6.22□□□□□ -1.41
USP11P51784 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC6.22□□□□□ -1.41
USP11P51784 BX248409.1-201ENST00000455497 255 ntBASIC6.22□□□□□ -1.41
USP11P51784 AC010307.1-201ENST00000467206 836 ntBASIC6.22□□□□□ -1.41
USP11P51784 AC090602.1-201ENST00000469695 252 ntBASIC6.22□□□□□ -1.41
USP11P51784 NIFKP7-201ENST00000503365 834 ntBASIC6.22□□□□□ -1.41
USP11P51784 ATP5LP3-201ENST00000514223 304 ntBASIC6.22□□□□□ -1.41
USP11P51784 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.22□□□□□ -1.41
USP11P51784 IGKV2-18-201ENST00000522607 343 ntBASIC6.22□□□□□ -1.41
USP11P51784 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.22□□□□□ -1.41
USP11P51784 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.22□□□□□ -1.41
USP11P51784 AP003122.4-201ENST00000530980 758 ntBASIC6.22□□□□□ -1.41
USP11P51784 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
USP11P51784 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.22□□□□□ -1.41
USP11P51784 HIF1AP1-201ENST00000553642 175 ntBASIC6.22□□□□□ -1.41
USP11P51784 AL390334.1-201ENST00000556395 450 ntBASIC6.22□□□□□ -1.41
USP11P51784 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.22□□□□□ -1.41
USP11P51784 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.22□□□□□ -1.41
USP11P51784 AP005403.1-201ENST00000579720 229 ntBASIC6.22□□□□□ -1.41
USP11P51784 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC6.22□□□□□ -1.41
USP11P51784 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC6.22□□□□□ -1.41
USP11P51784 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.22□□□□□ -1.41
USP11P51784 AC018695.5-201ENST00000605872 315 ntBASIC6.22□□□□□ -1.41
USP11P51784 AC006504.8-201ENST00000621046 635 ntBASIC6.22□□□□□ -1.41
USP11P51784 AC073869.8-201ENST00000641806 335 ntBASIC6.22□□□□□ -1.41
USP11P51784 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.22□□□□□ -1.41
USP11P51784 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.22□□□□□ -1.41
USP11P51784 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.22□□□□□ -1.41
USP11P51784 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
USP11P51784 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
USP11P51784 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
USP11P51784 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
USP11P51784 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.22□□□□□ -1.41
USP11P51784 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
USP11P51784 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
USP11P51784 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
USP11P51784 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
USP11P51784 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.21□□□□□ -1.41
USP11P51784 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.21□□□□□ -1.41
USP11P51784 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
USP11P51784 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USP11P51784 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
USP11P51784 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.21□□□□□ -1.42
USP11P51784 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
USP11P51784 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USP11P51784 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USP11P51784 RN7SKP185-201ENST00000362813 326 ntBASIC6.21□□□□□ -1.42
USP11P51784 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USP11P51784 AL356432.1-201ENST00000405809 419 ntBASIC6.21□□□□□ -1.42
USP11P51784 VN1R36P-201ENST00000414936 291 ntBASIC6.21□□□□□ -1.42
USP11P51784 AC013429.2-201ENST00000418798 781 ntBASIC6.21□□□□□ -1.42
USP11P51784 AC114814.2-201ENST00000419195 485 ntBASIC6.21□□□□□ -1.42
USP11P51784 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.21□□□□□ -1.42
USP11P51784 SRSF1P1-201ENST00000424058 520 ntBASIC6.21□□□□□ -1.42
USP11P51784 AC007559.1-201ENST00000428736 355 ntBASIC6.21□□□□□ -1.42
USP11P51784 BMS1P19-201ENST00000433925 393 ntBASIC6.21□□□□□ -1.42
USP11P51784 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.21□□□□□ -1.42
USP11P51784 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.21□□□□□ -1.42
USP11P51784 AL672138.1-201ENST00000450604 1015 ntBASIC6.21□□□□□ -1.42
USP11P51784 AL590365.1-201ENST00000450788 243 ntBASIC6.21□□□□□ -1.42
USP11P51784 RPL18AP17-201ENST00000455326 198 ntBASIC6.21□□□□□ -1.42
USP11P51784 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
USP11P51784 SUMO2P4-201ENST00000504193 276 ntBASIC6.21□□□□□ -1.42
USP11P51784 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC6.21□□□□□ -1.42
USP11P51784 AC026427.2-201ENST00000506228 536 ntBASIC6.21□□□□□ -1.42
USP11P51784 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC6.21□□□□□ -1.42
USP11P51784 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.21□□□□□ -1.42
USP11P51784 AC091912.1-201ENST00000511351 248 ntBASIC6.21□□□□□ -1.42
USP11P51784 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.21□□□□□ -1.42
USP11P51784 MTND6P2-201ENST00000512226 524 ntBASIC6.21□□□□□ -1.42
USP11P51784 AC108064.1-201ENST00000513791 460 ntBASIC6.21□□□□□ -1.42
USP11P51784 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.21□□□□□ -1.42
USP11P51784 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.21□□□□□ -1.42
USP11P51784 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.21□□□□□ -1.42
USP11P51784 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.21□□□□□ -1.42
USP11P51784 AC027026.1-201ENST00000532323 742 ntBASIC6.21□□□□□ -1.42
USP11P51784 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.21□□□□□ -1.42
USP11P51784 NACA-211ENST00000548563 827 ntTSL 5 BASIC6.21□□□□□ -1.42
USP11P51784 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms