Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
USP6P35125 MIR5004-201ENST00000579078 107 ntBASIC4.73□□□□□ -1.65
USP6P35125 MIR4325-201ENST00000583049 90 ntBASIC4.73□□□□□ -1.65
USP6P35125 AC067852.3-201ENST00000589177 561 ntBASIC4.73□□□□□ -1.65
USP6P35125 AL606834.2-201ENST00000602954 668 ntBASIC4.73□□□□□ -1.65
USP6P35125 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.73□□□□□ -1.65
USP6P35125 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.73□□□□□ -1.65
USP6P35125 AC079298.2-201ENST00000623885 459 ntBASIC4.73□□□□□ -1.65
USP6P35125 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.73□□□□□ -1.65
USP6P35125 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP6P35125 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.73□□□□□ -1.65
USP6P35125 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
USP6P35125 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
USP6P35125 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP6P35125 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP6P35125 RNA5SP197-201ENST00000363357 119 ntBASIC4.72□□□□□ -1.65
USP6P35125 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP6P35125 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.72□□□□□ -1.65
USP6P35125 UBE2V1P1-201ENST00000430836 445 ntBASIC4.72□□□□□ -1.65
USP6P35125 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.72□□□□□ -1.65
USP6P35125 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.72□□□□□ -1.65
USP6P35125 AC084357.1-201ENST00000473404 255 ntBASIC4.72□□□□□ -1.65
USP6P35125 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.72□□□□□ -1.65
USP6P35125 AC004069.2-201ENST00000505438 1114 ntBASIC4.72□□□□□ -1.65
USP6P35125 NPM1P52-201ENST00000518264 846 ntBASIC4.72□□□□□ -1.65
USP6P35125 UBE2NP1-201ENST00000545592 458 ntBASIC4.72□□□□□ -1.65
USP6P35125 EIF4BP1-201ENST00000554881 351 ntBASIC4.72□□□□□ -1.65
USP6P35125 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.72□□□□□ -1.65
USP6P35125 MIR4276-201ENST00000584832 70 ntBASIC4.72□□□□□ -1.65
USP6P35125 AC125494.3-201ENST00000602759 455 ntBASIC4.72□□□□□ -1.65
USP6P35125 AC008638.3-201ENST00000603341 463 ntBASIC4.72□□□□□ -1.65
USP6P35125 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
USP6P35125 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.72□□□□□ -1.65
USP6P35125 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.72□□□□□ -1.65
USP6P35125 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
USP6P35125 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
USP6P35125 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
USP6P35125 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP6P35125 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
USP6P35125 U3.19-201ENST00000390893 196 ntBASIC4.72□□□□□ -1.65
USP6P35125 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.72□□□□□ -1.65
USP6P35125 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.72□□□□□ -1.65
USP6P35125 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.72□□□□□ -1.65
USP6P35125 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.72□□□□□ -1.65
USP6P35125 AC244453.4-201ENST00000419150 388 ntBASIC4.72□□□□□ -1.65
USP6P35125 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.72□□□□□ -1.65
USP6P35125 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP6P35125 AC023598.1-201ENST00000472521 361 ntBASIC4.72□□□□□ -1.65
USP6P35125 RPS27AP1-201ENST00000475545 471 ntBASIC4.72□□□□□ -1.65
USP6P35125 RN7SL504P-201ENST00000494496 287 ntBASIC4.72□□□□□ -1.65
USP6P35125 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.72□□□□□ -1.65
USP6P35125 AC139783.2-201ENST00000504847 1145 ntBASIC4.72□□□□□ -1.65
USP6P35125 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
USP6P35125 RFPL4AP3-201ENST00000515267 345 ntBASIC4.72□□□□□ -1.65
USP6P35125 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.72□□□□□ -1.65
USP6P35125 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.72□□□□□ -1.65
USP6P35125 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.72□□□□□ -1.65
USP6P35125 MIR5680-201ENST00000577577 84 ntBASIC4.72□□□□□ -1.65
USP6P35125 CKS1BP3-201ENST00000600888 237 ntBASIC4.72□□□□□ -1.65
USP6P35125 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
USP6P35125 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.71□□□□□ -1.66
USP6P35125 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.71□□□□□ -1.66
USP6P35125 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
USP6P35125 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.71□□□□□ -1.66
USP6P35125 UBA52P6-201ENST00000399822 382 ntBASIC4.71□□□□□ -1.66
USP6P35125 AL357075.1-201ENST00000404107 726 ntBASIC4.71□□□□□ -1.66
USP6P35125 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.71□□□□□ -1.66
USP6P35125 RPS20P1-201ENST00000434853 354 ntBASIC4.71□□□□□ -1.66
USP6P35125 AC127537.2-201ENST00000439258 465 ntBASIC4.71□□□□□ -1.66
USP6P35125 RPS29P31-201ENST00000446147 164 ntBASIC4.71□□□□□ -1.66
USP6P35125 AC073587.1-201ENST00000447093 876 ntBASIC4.71□□□□□ -1.66
USP6P35125 FCF1P8-201ENST00000510322 597 ntBASIC4.71□□□□□ -1.66
USP6P35125 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.71□□□□□ -1.66
USP6P35125 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.71□□□□□ -1.66
USP6P35125 AL133457.1-201ENST00000564251 987 ntBASIC4.71□□□□□ -1.66
USP6P35125 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.71□□□□□ -1.66
USP6P35125 AC233309.1-201ENST00000619522 751 ntBASIC4.71□□□□□ -1.66
USP6P35125 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.71□□□□□ -1.66
USP6P35125 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP6P35125 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP6P35125 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
USP6P35125 OTUD4P1-201ENST00000237841 3067 ntBASIC4.7□□□□□ -1.66
USP6P35125 AC092111.2-201ENST00000611627 1414 ntBASIC4.7□□□□□ -1.66
USP6P35125 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.7□□□□□ -1.66
USP6P35125 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
USP6P35125 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.7□□□□□ -1.66
USP6P35125 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.7□□□□□ -1.66
USP6P35125 BX119904.1-201ENST00000432026 348 ntBASIC4.7□□□□□ -1.66
USP6P35125 XKRYP6-201ENST00000440468 1116 ntBASIC4.7□□□□□ -1.66
USP6P35125 AL831737.1-201ENST00000441288 271 ntBASIC4.7□□□□□ -1.66
USP6P35125 XKRYP3-201ENST00000442113 1116 ntBASIC4.7□□□□□ -1.66
USP6P35125 RSL24D1P2-201ENST00000445584 366 ntBASIC4.7□□□□□ -1.66
USP6P35125 RAD1P2-201ENST00000446414 663 ntBASIC4.7□□□□□ -1.66
USP6P35125 RPL5P30-201ENST00000465511 891 ntBASIC4.7□□□□□ -1.66
USP6P35125 RPS26P15-201ENST00000488067 348 ntBASIC4.7□□□□□ -1.66
USP6P35125 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.7□□□□□ -1.66
USP6P35125 AC069499.1-201ENST00000489433 509 ntBASIC4.7□□□□□ -1.66
USP6P35125 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.7□□□□□ -1.66
USP6P35125 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.7□□□□□ -1.66
USP6P35125 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms