Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AP005264.7-201ENST00000625003 745 ntBASIC4.97□□□□□ -1.61
TM4SF1P30408 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.97□□□□□ -1.61
TM4SF1P30408 AC006927.2-201ENST00000639256 389 ntBASIC4.97□□□□□ -1.61
TM4SF1P30408 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
TM4SF1P30408 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TM4SF1P30408 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.97□□□□□ -1.61
TM4SF1P30408 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TM4SF1P30408 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
TM4SF1P30408 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
TM4SF1P30408 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
TM4SF1P30408 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TM4SF1P30408 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
TM4SF1P30408 MAPK10-320ENST00000641462 6696 ntBASIC4.96□□□□□ -1.62
TM4SF1P30408 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
TM4SF1P30408 RNA5SP72-201ENST00000364442 117 ntBASIC4.96□□□□□ -1.62
TM4SF1P30408 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TM4SF1P30408 VDAC2P1-201ENST00000399358 958 ntBASIC4.96□□□□□ -1.62
TM4SF1P30408 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.96□□□□□ -1.62
TM4SF1P30408 AL591419.1-201ENST00000427423 339 ntBASIC4.96□□□□□ -1.62
TM4SF1P30408 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.96□□□□□ -1.62
TM4SF1P30408 AL159987.2-201ENST00000432754 307 ntBASIC4.96□□□□□ -1.62
TM4SF1P30408 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.96□□□□□ -1.62
TM4SF1P30408 HSPD1P21-201ENST00000436541 245 ntBASIC4.96□□□□□ -1.62
TM4SF1P30408 RPL12P46-201ENST00000436610 195 ntBASIC4.96□□□□□ -1.62
TM4SF1P30408 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.96□□□□□ -1.62
TM4SF1P30408 FABP5P3-201ENST00000437960 408 ntBASIC4.96□□□□□ -1.62
TM4SF1P30408 RPL23AP89-201ENST00000439324 255 ntBASIC4.96□□□□□ -1.62
TM4SF1P30408 AC002542.1-201ENST00000440683 193 ntBASIC4.96□□□□□ -1.62
TM4SF1P30408 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.96□□□□□ -1.62
TM4SF1P30408 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.96□□□□□ -1.62
TM4SF1P30408 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.96□□□□□ -1.62
TM4SF1P30408 PPIAP15-201ENST00000479662 484 ntBASIC4.96□□□□□ -1.62
TM4SF1P30408 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
TM4SF1P30408 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TM4SF1P30408 AC026427.2-201ENST00000506228 536 ntBASIC4.96□□□□□ -1.62
TM4SF1P30408 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.96□□□□□ -1.62
TM4SF1P30408 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.96□□□□□ -1.62
TM4SF1P30408 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.96□□□□□ -1.62
TM4SF1P30408 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.96□□□□□ -1.62
TM4SF1P30408 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.96□□□□□ -1.62
TM4SF1P30408 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.96□□□□□ -1.62
TM4SF1P30408 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.96□□□□□ -1.62
TM4SF1P30408 AC092354.2-201ENST00000607786 514 ntBASIC4.96□□□□□ -1.62
TM4SF1P30408 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TM4SF1P30408 AC073530.2-201ENST00000623987 261 ntBASIC4.96□□□□□ -1.62
TM4SF1P30408 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.96□□□□□ -1.62
TM4SF1P30408 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.96□□□□□ -1.62
TM4SF1P30408 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TM4SF1P30408 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TM4SF1P30408 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TM4SF1P30408 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
TM4SF1P30408 AC022031.1-201ENST00000585985 2593 ntBASIC4.96□□□□□ -1.62
TM4SF1P30408 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
TM4SF1P30408 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TM4SF1P30408 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
TM4SF1P30408 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TM4SF1P30408 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.95□□□□□ -1.62
TM4SF1P30408 ZNF849P-201ENST00000594711 1566 ntBASIC4.95□□□□□ -1.62
TM4SF1P30408 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TM4SF1P30408 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.95□□□□□ -1.62
TM4SF1P30408 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TM4SF1P30408 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TM4SF1P30408 SNORD35B-201ENST00000363660 87 ntBASIC4.95□□□□□ -1.62
TM4SF1P30408 RNU6-146P-201ENST00000384602 108 ntBASIC4.95□□□□□ -1.62
TM4SF1P30408 RNVU1-14-201ENST00000384770 164 ntBASIC4.95□□□□□ -1.62
TM4SF1P30408 SNORA68.2-201ENST00000391263 128 ntBASIC4.95□□□□□ -1.62
TM4SF1P30408 RPL22P22-201ENST00000395439 379 ntBASIC4.95□□□□□ -1.62
TM4SF1P30408 RNU2-65P-201ENST00000410162 185 ntBASIC4.95□□□□□ -1.62
TM4SF1P30408 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.95□□□□□ -1.62
TM4SF1P30408 RPS29P4-201ENST00000414733 161 ntBASIC4.95□□□□□ -1.62
TM4SF1P30408 MTND2P15-201ENST00000418575 892 ntBASIC4.95□□□□□ -1.62
TM4SF1P30408 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.95□□□□□ -1.62
TM4SF1P30408 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
TM4SF1P30408 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TM4SF1P30408 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.95□□□□□ -1.62
TM4SF1P30408 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TM4SF1P30408 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.95□□□□□ -1.62
TM4SF1P30408 FABP3P2-201ENST00000453169 399 ntBASIC4.95□□□□□ -1.62
TM4SF1P30408 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.95□□□□□ -1.62
TM4SF1P30408 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.95□□□□□ -1.62
TM4SF1P30408 RPS26P28-201ENST00000470806 348 ntBASIC4.95□□□□□ -1.62
TM4SF1P30408 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
TM4SF1P30408 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.95□□□□□ -1.62
TM4SF1P30408 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.95□□□□□ -1.62
TM4SF1P30408 AC104619.4-201ENST00000510773 249 ntBASIC4.95□□□□□ -1.62
TM4SF1P30408 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TM4SF1P30408 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.95□□□□□ -1.62
TM4SF1P30408 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.95□□□□□ -1.62
TM4SF1P30408 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.95□□□□□ -1.62
TM4SF1P30408 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TM4SF1P30408 AC006518.1-201ENST00000541449 943 ntBASIC4.95□□□□□ -1.62
TM4SF1P30408 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.95□□□□□ -1.62
TM4SF1P30408 CYB5AP5-201ENST00000549779 389 ntBASIC4.95□□□□□ -1.62
TM4SF1P30408 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.95□□□□□ -1.62
TM4SF1P30408 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.95□□□□□ -1.62
TM4SF1P30408 MTND4LP24-201ENST00000572277 291 ntBASIC4.95□□□□□ -1.62
TM4SF1P30408 ZNF415P1-201ENST00000582279 1166 ntBASIC4.95□□□□□ -1.62
TM4SF1P30408 SLC25A36P1-201ENST00000590111 465 ntBASIC4.95□□□□□ -1.62
TM4SF1P30408 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.95□□□□□ -1.62
TM4SF1P30408 AC017104.5-201ENST00000637647 639 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms