Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.96□□□□□ -1.78
XRCC1P18887 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.96□□□□□ -1.78
XRCC1P18887 AC007424.1-203ENST00000554613 687 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 AC106785.1-201ENST00000565935 262 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 RPL23AP87-202ENST00000573039 466 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 AC025627.2-201ENST00000576220 160 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 MIR4716-201ENST00000579628 84 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 AC053481.4-201ENST00000583164 216 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.96□□□□□ -1.78
XRCC1P18887 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
XRCC1P18887 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 AC079880.2-201ENST00000603790 1213 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 AC114878.2-201ENST00000604863 1251 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 AC099676.1-201ENST00000608886 657 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 AP000255.1-201ENST00000610276 676 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 AC090246.1-201ENST00000616499 426 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 CR392039.4-201ENST00000624968 501 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.96□□□□□ -1.78
XRCC1P18887 AC083865.1-201ENST00000636634 831 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.96□□□□□ -1.78
XRCC1P18887 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
XRCC1P18887 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.96□□□□□ -1.78
XRCC1P18887 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.96□□□□□ -1.78
XRCC1P18887 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
XRCC1P18887 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
XRCC1P18887 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.95□□□□□ -1.78
XRCC1P18887 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
XRCC1P18887 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.95□□□□□ -1.78
XRCC1P18887 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
XRCC1P18887 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
XRCC1P18887 RNU6-650P-201ENST00000365658 111 ntBASIC3.95□□□□□ -1.78
XRCC1P18887 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
XRCC1P18887 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.95□□□□□ -1.78
XRCC1P18887 AL445189.1-201ENST00000405722 338 ntBASIC3.95□□□□□ -1.78
XRCC1P18887 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.95□□□□□ -1.78
XRCC1P18887 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.95□□□□□ -1.78
XRCC1P18887 AC006511.1-201ENST00000470614 315 ntBASIC3.95□□□□□ -1.78
XRCC1P18887 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.95□□□□□ -1.78
XRCC1P18887 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.95□□□□□ -1.78
XRCC1P18887 AC010460.1-201ENST00000507087 466 ntBASIC3.95□□□□□ -1.78
XRCC1P18887 KRT19P6-201ENST00000510983 209 ntBASIC3.95□□□□□ -1.78
XRCC1P18887 AC026402.1-201ENST00000513642 170 ntBASIC3.95□□□□□ -1.78
XRCC1P18887 NARSP2-201ENST00000518524 679 ntBASIC3.95□□□□□ -1.78
XRCC1P18887 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.95□□□□□ -1.78
XRCC1P18887 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.95□□□□□ -1.78
XRCC1P18887 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.95□□□□□ -1.78
XRCC1P18887 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
XRCC1P18887 RFPL1S-203ENST00000539579 330 ntBASIC3.95□□□□□ -1.78
XRCC1P18887 AC025260.1-201ENST00000548858 430 ntBASIC3.95□□□□□ -1.78
XRCC1P18887 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.95□□□□□ -1.78
XRCC1P18887 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
XRCC1P18887 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.95□□□□□ -1.78
XRCC1P18887 ZNF92P2-201ENST00000600543 1059 ntBASIC3.95□□□□□ -1.78
XRCC1P18887 AC104662.1-201ENST00000604448 511 ntBASIC3.95□□□□□ -1.78
XRCC1P18887 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
XRCC1P18887 U6.48-201ENST00000618523 106 ntBASIC3.95□□□□□ -1.78
XRCC1P18887 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.95□□□□□ -1.78
XRCC1P18887 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
XRCC1P18887 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
XRCC1P18887 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
XRCC1P18887 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
XRCC1P18887 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
XRCC1P18887 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
XRCC1P18887 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.95□□□□□ -1.78
XRCC1P18887 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
XRCC1P18887 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
XRCC1P18887 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.94□□□□□ -1.78
XRCC1P18887 AC095050.2-201ENST00000510748 1458 ntBASIC3.94□□□□□ -1.78
XRCC1P18887 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.94□□□□□ -1.78
XRCC1P18887 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.94□□□□□ -1.78
XRCC1P18887 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
XRCC1P18887 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
XRCC1P18887 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
XRCC1P18887 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.94□□□□□ -1.78
XRCC1P18887 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
XRCC1P18887 RPL31P52-201ENST00000407532 367 ntBASIC3.94□□□□□ -1.78
XRCC1P18887 AL121882.1-201ENST00000422893 417 ntBASIC3.94□□□□□ -1.78
XRCC1P18887 OR5BE1P-201ENST00000425977 939 ntBASIC3.94□□□□□ -1.78
XRCC1P18887 AL691449.1-201ENST00000426570 421 ntBASIC3.94□□□□□ -1.78
XRCC1P18887 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.94□□□□□ -1.78
XRCC1P18887 KCTD10P1-201ENST00000434203 625 ntBASIC3.94□□□□□ -1.78
XRCC1P18887 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.94□□□□□ -1.78
XRCC1P18887 RPL7P29-201ENST00000437151 728 ntBASIC3.94□□□□□ -1.78
XRCC1P18887 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.94□□□□□ -1.78
XRCC1P18887 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
XRCC1P18887 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.94□□□□□ -1.78
XRCC1P18887 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.94□□□□□ -1.78
XRCC1P18887 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.94□□□□□ -1.78
XRCC1P18887 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.94□□□□□ -1.78
XRCC1P18887 RN7SL132P-201ENST00000478131 296 ntBASIC3.94□□□□□ -1.78
XRCC1P18887 RN7SL271P-201ENST00000487601 295 ntBASIC3.94□□□□□ -1.78
XRCC1P18887 AC110792.1-201ENST00000491826 472 ntBASIC3.94□□□□□ -1.78
XRCC1P18887 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.94□□□□□ -1.78
XRCC1P18887 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.94□□□□□ -1.78
XRCC1P18887 OSBPL9P3-201ENST00000534523 595 ntBASIC3.94□□□□□ -1.78
XRCC1P18887 AC091516.1-201ENST00000549191 703 ntBASIC3.94□□□□□ -1.78
XRCC1P18887 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.94□□□□□ -1.78
XRCC1P18887 GNRHR2P1-201ENST00000555315 631 ntBASIC3.94□□□□□ -1.78
XRCC1P18887 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.94□□□□□ -1.78
XRCC1P18887 AL121594.4-201ENST00000556211 1196 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms