Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RPL23AP38-201ENST00000423801 469 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.78□□□□□ -1.96
CXCL1P09341 AC006455.6-201ENST00000426192 893 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.78□□□□□ -1.96
CXCL1P09341 MTCYBP21-201ENST00000443300 1113 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 EIF2S2P2-201ENST00000447161 982 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.78□□□□□ -1.96
CXCL1P09341 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC2.78□□□□□ -1.96
CXCL1P09341 AC114982.2-201ENST00000461396 358 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 SNRPGP3-201ENST00000469405 227 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 TMED11P-201ENST00000479478 690 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 AC092451.1-201ENST00000480211 153 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 RPS3AP6-201ENST00000484430 795 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 AC108860.1-201ENST00000484521 383 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC2.78□□□□□ -1.96
CXCL1P09341 AC091167.1-201ENST00000492017 396 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 MGST2-204ENST00000506797 634 ntTSL 2 BASIC2.78□□□□□ -1.96
CXCL1P09341 AC025674.1-201ENST00000507074 324 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 IGKV2D-19-201ENST00000523346 262 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 AL121766.1-201ENST00000547436 487 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 OR4H12P-201ENST00000556269 907 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 TRAV15-201ENST00000556680 249 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 ZNF192P1-203ENST00000565888 810 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC2.78□□□□□ -1.96
CXCL1P09341 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC2.78□□□□□ -1.96
CXCL1P09341 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CXCL1P09341 AL163642.2-201ENST00000604722 1019 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CXCL1P09341 AP003117.2-201ENST00000606010 545 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 AC012213.4-201ENST00000606457 354 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CXCL1P09341 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CXCL1P09341 AP001784.1-201ENST00000624107 428 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC2.78□□□□□ -1.96
CXCL1P09341 RNF6P1-201ENST00000444889 1784 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.78□□□□□ -1.96
CXCL1P09341 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CXCL1P09341 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CXCL1P09341 AC008264.2-201ENST00000610193 3731 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CXCL1P09341 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CXCL1P09341 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC2.78□□□□□ -1.96
CXCL1P09341 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.78□□□□□ -1.96
CXCL1P09341 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
CXCL1P09341 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CXCL1P09341 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CXCL1P09341 AC119744.1-201ENST00000454746 1715 ntBASIC2.77□□□□□ -1.97
CXCL1P09341 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC2.77□□□□□ -1.97
CXCL1P09341 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
CXCL1P09341 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CXCL1P09341 RNA5SP424-201ENST00000390988 115 ntBASIC2.77□□□□□ -1.97
CXCL1P09341 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.77□□□□□ -1.97
CXCL1P09341 TCEA1P2-201ENST00000420496 906 ntBASIC2.77□□□□□ -1.97
CXCL1P09341 AL590762.4-201ENST00000425885 253 ntBASIC2.77□□□□□ -1.97
CXCL1P09341 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC2.77□□□□□ -1.97
CXCL1P09341 MRPS18BP2-201ENST00000434310 759 ntBASIC2.77□□□□□ -1.97
CXCL1P09341 ISCA1P2-201ENST00000438679 421 ntBASIC2.77□□□□□ -1.97
CXCL1P09341 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC2.77□□□□□ -1.97
CXCL1P09341 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.77□□□□□ -1.97
CXCL1P09341 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC2.77□□□□□ -1.97
CXCL1P09341 AC011276.1-201ENST00000469688 323 ntBASIC2.77□□□□□ -1.97
CXCL1P09341 AC010618.1-201ENST00000469924 477 ntBASIC2.77□□□□□ -1.97
CXCL1P09341 AC006511.1-201ENST00000470614 315 ntBASIC2.77□□□□□ -1.97
CXCL1P09341 RPL21P103-201ENST00000479921 488 ntBASIC2.77□□□□□ -1.97
CXCL1P09341 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.77□□□□□ -1.97
CXCL1P09341 RNA5SP385-201ENST00000515947 110 ntBASIC2.77□□□□□ -1.97
CXCL1P09341 RN7SKP82-201ENST00000516786 223 ntBASIC2.77□□□□□ -1.97
CXCL1P09341 TBCA-203ENST00000517679 545 ntTSL 3 BASIC2.77□□□□□ -1.97
CXCL1P09341 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC2.77□□□□□ -1.97
CXCL1P09341 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.77□□□□□ -1.97
CXCL1P09341 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC2.77□□□□□ -1.97
CXCL1P09341 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.77□□□□□ -1.97
CXCL1P09341 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC2.77□□□□□ -1.97
CXCL1P09341 IPO5P1-202ENST00000600039 287 ntBASIC2.77□□□□□ -1.97
CXCL1P09341 RNA5SP108-201ENST00000605921 117 ntBASIC2.77□□□□□ -1.97
CXCL1P09341 SNORA35B-201ENST00000607417 129 ntBASIC2.77□□□□□ -1.97
CXCL1P09341 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.77□□□□□ -1.97
CXCL1P09341 MIR6729-201ENST00000618194 65 ntBASIC2.77□□□□□ -1.97
CXCL1P09341 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CXCL1P09341 LGI1-209ENST00000627699 664 ntTSL 3 BASIC2.77□□□□□ -1.97
CXCL1P09341 AC007656.2-201ENST00000624902 4547 ntBASIC2.77□□□□□ -1.97
CXCL1P09341 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CXCL1P09341 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.77□□□□□ -1.97
CXCL1P09341 XPOTP1-201ENST00000443317 2398 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CXCL1P09341 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CXCL1P09341 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
CXCL1P09341 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CXCL1P09341 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CXCL1P09341 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CXCL1P09341 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CXCL1P09341 RPL7P26-201ENST00000333817 754 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CXCL1P09341 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CXCL1P09341 RNA5SP505-201ENST00000364748 108 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC2.76□□□□□ -1.97
CXCL1P09341 RNU6-398P-201ENST00000384143 109 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CXCL1P09341 RPL21P3-201ENST00000395517 478 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 GSTA12P-201ENST00000402398 508 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms