Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC114755.5-201ENST00000447760 831 ntBASIC3.6□□□□□ -1.83
SCN2BO60939 AL162151.2-201ENST00000448875 158 ntBASIC3.6□□□□□ -1.83
SCN2BO60939 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.6□□□□□ -1.83
SCN2BO60939 DNAJC19P1-201ENST00000455312 319 ntBASIC3.6□□□□□ -1.83
SCN2BO60939 RPL23AP62-201ENST00000463396 453 ntBASIC3.6□□□□□ -1.83
SCN2BO60939 AC146507.1-201ENST00000468335 354 ntBASIC3.6□□□□□ -1.83
SCN2BO60939 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SCN2BO60939 RPS4XP15-201ENST00000489210 795 ntBASIC3.6□□□□□ -1.83
SCN2BO60939 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.6□□□□□ -1.83
SCN2BO60939 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SCN2BO60939 RN7SKP209-201ENST00000516888 304 ntBASIC3.6□□□□□ -1.83
SCN2BO60939 AC067904.2-201ENST00000517322 1283 ntBASIC3.6□□□□□ -1.83
SCN2BO60939 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.6□□□□□ -1.83
SCN2BO60939 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.6□□□□□ -1.83
SCN2BO60939 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.6□□□□□ -1.83
SCN2BO60939 AL109741.3-201ENST00000561748 592 ntBASIC3.6□□□□□ -1.83
SCN2BO60939 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.6□□□□□ -1.83
SCN2BO60939 Z82195.1-201ENST00000604558 398 ntBASIC3.6□□□□□ -1.83
SCN2BO60939 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.6□□□□□ -1.83
SCN2BO60939 AC121761.2-201ENST00000617300 689 ntBASIC3.6□□□□□ -1.83
SCN2BO60939 AC119744.1-201ENST00000454746 1715 ntBASIC3.6□□□□□ -1.83
SCN2BO60939 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SCN2BO60939 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SCN2BO60939 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SCN2BO60939 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
SCN2BO60939 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.6□□□□□ -1.83
SCN2BO60939 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SCN2BO60939 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.6□□□□□ -1.83
SCN2BO60939 AL592494.2-201ENST00000425455 1548 ntBASIC3.6□□□□□ -1.83
SCN2BO60939 CEP170P1-201ENST00000502249 4587 ntBASIC3.6□□□□□ -1.83
SCN2BO60939 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SCN2BO60939 U1.1-201ENST00000384101 164 ntBASIC3.59□□□□□ -1.83
SCN2BO60939 RNU6-356P-201ENST00000384140 107 ntBASIC3.59□□□□□ -1.83
SCN2BO60939 RNU6-185P-201ENST00000384421 107 ntBASIC3.59□□□□□ -1.83
SCN2BO60939 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.59□□□□□ -1.83
SCN2BO60939 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.59□□□□□ -1.83
SCN2BO60939 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.59□□□□□ -1.83
SCN2BO60939 HIGD1AP12-201ENST00000427832 281 ntBASIC3.59□□□□□ -1.83
SCN2BO60939 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SCN2BO60939 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.59□□□□□ -1.83
SCN2BO60939 RPS26P40-201ENST00000435209 294 ntBASIC3.59□□□□□ -1.83
SCN2BO60939 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.59□□□□□ -1.83
SCN2BO60939 MED6P1-201ENST00000439659 713 ntBASIC3.59□□□□□ -1.83
SCN2BO60939 HMGN2P21-201ENST00000447764 270 ntBASIC3.59□□□□□ -1.83
SCN2BO60939 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.59□□□□□ -1.83
SCN2BO60939 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.59□□□□□ -1.83
SCN2BO60939 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.59□□□□□ -1.83
SCN2BO60939 PPIAP15-201ENST00000479662 484 ntBASIC3.59□□□□□ -1.83
SCN2BO60939 RPL7P47-201ENST00000497299 556 ntBASIC3.59□□□□□ -1.83
SCN2BO60939 AC005921.1-201ENST00000510589 286 ntBASIC3.59□□□□□ -1.83
SCN2BO60939 AC021146.1-201ENST00000511202 716 ntBASIC3.59□□□□□ -1.83
SCN2BO60939 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
SCN2BO60939 MTCO1P35-201ENST00000515270 228 ntBASIC3.59□□□□□ -1.83
SCN2BO60939 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.59□□□□□ -1.83
SCN2BO60939 OR4V1P-201ENST00000525394 1140 ntBASIC3.59□□□□□ -1.83
SCN2BO60939 AL121576.1-201ENST00000556055 276 ntBASIC3.59□□□□□ -1.83
SCN2BO60939 PARP1P2-201ENST00000556806 195 ntBASIC3.59□□□□□ -1.83
SCN2BO60939 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.59□□□□□ -1.83
SCN2BO60939 ZNF192P1-203ENST00000565888 810 ntBASIC3.59□□□□□ -1.83
SCN2BO60939 MTND4LP24-201ENST00000572277 291 ntBASIC3.59□□□□□ -1.83
SCN2BO60939 MIR548Y-201ENST00000582739 110 ntBASIC3.59□□□□□ -1.83
SCN2BO60939 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.59□□□□□ -1.83
SCN2BO60939 AL591034.3-201ENST00000605511 685 ntBASIC3.59□□□□□ -1.83
SCN2BO60939 SNORA62.6-201ENST00000606322 83 ntBASIC3.59□□□□□ -1.83
SCN2BO60939 AC018754.1-201ENST00000607486 925 ntBASIC3.59□□□□□ -1.83
SCN2BO60939 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.59□□□□□ -1.83
SCN2BO60939 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SCN2BO60939 AC006065.5-201ENST00000623427 349 ntBASIC3.59□□□□□ -1.83
SCN2BO60939 MIR4278-201ENST00000636094 69 ntBASIC3.59□□□□□ -1.83
SCN2BO60939 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SCN2BO60939 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.84
SCN2BO60939 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SCN2BO60939 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
SCN2BO60939 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SCN2BO60939 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.58□□□□□ -1.84
SCN2BO60939 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SCN2BO60939 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN2BO60939 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SCN2BO60939 RNU6-213P-201ENST00000384051 104 ntBASIC3.58□□□□□ -1.84
SCN2BO60939 SOD2P1-201ENST00000396543 562 ntBASIC3.58□□□□□ -1.84
SCN2BO60939 RPL21P65-201ENST00000406094 466 ntBASIC3.58□□□□□ -1.84
SCN2BO60939 RPL30P2-201ENST00000414021 291 ntBASIC3.58□□□□□ -1.84
SCN2BO60939 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN2BO60939 HMGB3P5-201ENST00000428894 612 ntBASIC3.58□□□□□ -1.84
SCN2BO60939 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN2BO60939 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN2BO60939 AC110792.2-201ENST00000510278 224 ntBASIC3.58□□□□□ -1.84
SCN2BO60939 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.58□□□□□ -1.84
SCN2BO60939 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN2BO60939 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN2BO60939 RN7SKP83-201ENST00000516512 178 ntBASIC3.58□□□□□ -1.84
SCN2BO60939 SCARNA14-201ENST00000516903 136 ntBASIC3.58□□□□□ -1.84
SCN2BO60939 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.58□□□□□ -1.84
SCN2BO60939 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN2BO60939 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.58□□□□□ -1.84
SCN2BO60939 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN2BO60939 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.58□□□□□ -1.84
SCN2BO60939 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.58□□□□□ -1.84
SCN2BO60939 CENPUP2-201ENST00000555897 1186 ntBASIC3.58□□□□□ -1.84
SCN2BO60939 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms