Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 MIR152-201ENST00000385212 87 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 RNU6-278P-201ENST00000390945 109 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 RN7SKP254-201ENST00000410685 310 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 RNU6-387P-201ENST00000411331 105 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 AMMECR1LP1-201ENST00000415152 841 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 HCG25-217ENST00000422366 702 ntTSL 3 BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 AC105052.2-201ENST00000434317 794 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 CR769767.1-201ENST00000436337 346 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 SDHCP3-201ENST00000445371 506 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 RPL23AP31-201ENST00000456160 467 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 RN7SL145P-201ENST00000469955 296 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 AC117503.1-201ENST00000472241 394 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 RPL19P11-201ENST00000495944 589 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 AC095057.1-201ENST00000507583 168 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 ENPP7P3-201ENST00000509123 241 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 AC112191.2-201ENST00000522428 333 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 HSPE1P2-201ENST00000554777 306 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 HNRNPCP4-201ENST00000571636 900 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 AC073046.2-201ENST00000604756 527 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 AL451044.1-201ENST00000604867 238 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 AL355488.2-201ENST00000609909 2850 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 RNA5SP472-201ENST00000363868 119 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 RNU6-153P-201ENST00000364422 104 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 RNA5SP172-201ENST00000365061 118 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 RN7SKP1-201ENST00000365525 307 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 MIR19A-201ENST00000384878 82 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 MIR625-201ENST00000385047 85 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 SNORD70.1-201ENST00000391007 85 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 AC008171.1-201ENST00000395058 200 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 AC016769.3-201ENST00000396562 315 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 RNU6-130P-201ENST00000411112 103 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 AL133384.1-201ENST00000412744 351 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 AC140479.3-201ENST00000418944 1126 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 BX276092.3-201ENST00000424182 230 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 AL353597.2-202ENST00000434901 373 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 RPEP5-201ENST00000441137 268 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 RNU7-167P-201ENST00000459160 62 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 AC006967.1-201ENST00000467608 589 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 AC069499.1-201ENST00000489433 509 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 RPL7P23-201ENST00000493874 747 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 RPS27P26-201ENST00000494583 239 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 RN7SKP242-201ENST00000515967 289 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 RNU6-1338P-201ENST00000516328 91 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 MIR4643-201ENST00000577473 78 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 AL078605.1-201ENST00000603529 500 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 AC111186.1-201ENST00000604684 130 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 DLEU2_2.2-201ENST00000615474 90 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 AC068234.2-201ENST00000619646 522 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 CDRT1-208ENST00000630868 794 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 NXPH1-205ENST00000602349 1953 ntBASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VPS9D1Q9Y2B5 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms