Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 CYP1D1P-201ENST00000416662 1433 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 AC012618.3-205ENST00000637896 1496 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 MIR320B1-201ENST00000390209 79 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 TAF9BP1-201ENST00000396646 746 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 AL121834.1-202ENST00000404494 277 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 RPS4XP9-201ENST00000405151 780 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 AL603766.1-201ENST00000407763 664 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 U3.32-201ENST00000408116 212 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 RNA5SP80-201ENST00000410475 111 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 Y_RNA.619-201ENST00000410951 90 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 NRBF2P2-201ENST00000413087 861 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 ATG4AP1-201ENST00000416893 538 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 IFNNP1-201ENST00000429219 553 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 AL591503.2-201ENST00000442314 1005 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 RPS26P30-201ENST00000443431 335 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 MTND1P27-201ENST00000451117 902 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 snoU13.20-201ENST00000459180 104 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 RPL7P48-201ENST00000461513 746 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 RN7SL481P-201ENST00000477764 299 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 AC068587.1-201ENST00000483613 781 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 IGJP1-201ENST00000522682 475 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 BRD9P1-201ENST00000529855 560 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 AC005832.3-201ENST00000537929 631 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 MIR3934-201ENST00000579806 107 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 AC006539.2-201ENST00000601729 572 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 AF131215.7-201ENST00000602443 707 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 AC004492.1-201ENST00000607036 742 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 uc_338.18-201ENST00000615451 175 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 AL158196.1-201ENST00000616786 434 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 AL356473.1-201ENST00000406203 1408 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 AC087359.1-201ENST00000508335 1740 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 AC093311.1-201ENST00000506586 2021 ntBASIC5.02□□□□□ -1.61
DKK3Q9UBP4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.02□□□□□ -1.61
DKK3Q9UBP4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 MTND4P31-201ENST00000425607 1343 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 AC013442.1-201ENST00000397347 228 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 SNORA11C-201ENST00000408532 129 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 AF186996.5-201ENST00000418098 904 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 COX6CP17-201ENST00000421389 185 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms