Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 RPL7AP49-201ENST00000429522 581 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 USP12PX-201ENST00000432383 1057 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AL591438.1-201ENST00000433508 581 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AP000936.3-201ENST00000438127 255 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AC239367.2-201ENST00000447309 705 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 Z99127.3-201ENST00000448158 395 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AL034418.1-201ENST00000448675 860 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AC092001.1-201ENST00000453012 261 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AC128716.1-201ENST00000475129 166 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 HMGN2P25-201ENST00000486956 268 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 RPS24P16-201ENST00000497294 392 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AC105252.1-201ENST00000503089 286 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AC022483.1-201ENST00000514020 567 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 IGKV2D-10-201ENST00000520194 281 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AC022360.1-201ENST00000521058 340 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 UBE2FP2-201ENST00000566646 462 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 BPTFP1-201ENST00000579209 492 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 VN1R84P-201ENST00000593697 235 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 RNU4-89P-201ENST00000607443 133 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AC107214.2-201ENST00000608204 634 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AC091834.1-201ENST00000614543 472 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AC007742.2-201ENST00000618226 398 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AC006338.1-201ENST00000618453 749 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AC099654.5-201ENST00000636479 350 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AC093311.1-201ENST00000506586 2021 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 RNA5SP90-201ENST00000364801 99 ntBASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 RPL23AP47-201ENST00000408017 460 ntBASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 MIR1277-201ENST00000408536 78 ntBASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 RPL17P12-201ENST00000413391 526 ntBASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 PPIAP17-201ENST00000438507 471 ntBASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 AC012512.1-201ENST00000446594 718 ntBASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 AL356981.1-201ENST00000454879 684 ntBASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 AC146507.1-201ENST00000468335 354 ntBASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 TRBV8-2-201ENST00000475637 270 ntBASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 ARL2BPP6-201ENST00000512757 439 ntBASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 MTCYBP43-201ENST00000513621 740 ntBASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 AC006427.1-201ENST00000514359 712 ntBASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 RNU6-507P-201ENST00000516045 100 ntBASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 AC006960.3-201ENST00000561845 705 ntBASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 AC011626.1-201ENST00000604710 562 ntBASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 Y_RNA.804-201ENST00000615262 101 ntBASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 DUXAP9-208ENST00000622815 614 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms