Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.46□□□□□ -1.69
PCDH9Q9HC56 AC025031.4-201ENST00000621248 3271 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 MTND4P8-201ENST00000514997 1362 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 RNU4-28P-201ENST00000364739 141 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 MIR93-201ENST00000385024 80 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 MTCO1P56-201ENST00000401674 224 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 RPS24P12-201ENST00000402084 394 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 RNU6-603P-201ENST00000411403 107 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 RPS24P7-201ENST00000416921 246 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 RPS27AP7-201ENST00000422792 455 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AC068287.1-201ENST00000430283 295 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 MTCO2P20-201ENST00000437339 673 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 ELOCP10-201ENST00000440624 327 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 MTATP6P26-201ENST00000445926 662 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 PTENP1-201ENST00000447117 1215 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AC004022.1-201ENST00000447766 1066 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 IFNWP4-201ENST00000453148 294 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 DHFRP3-201ENST00000455595 559 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AC091959.2-201ENST00000477363 321 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AC069528.1-202ENST00000482888 637 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AC025445.1-201ENST00000502728 300 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 MTCO3P15-201ENST00000526563 574 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AP002812.4-201ENST00000532139 286 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 MTND3P13-201ENST00000574391 343 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AC015688.2-201ENST00000584523 262 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AC061975.8-201ENST00000587058 721 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AP001542.2-201ENST00000593141 364 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 VN1R78P-201ENST00000597393 564 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AL035411.2-201ENST00000604022 421 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 ELOCP34-201ENST00000604436 327 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AL392112.1-201ENST00000605115 829 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AC107952.2-201ENST00000606048 486 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AL445423.1-201ENST00000609941 536 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AC231759.1-201ENST00000616455 597 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 AC007546.1-201ENST00000619452 559 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 CYP1D1P-201ENST00000416662 1433 ntBASIC4.46□□□□□ -1.7
PCDH9Q9HC56 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDH9Q9HC56 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 ZNF876P-202ENST00000398732 1485 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC008033.1-201ENST00000216407 1162 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 MIR448-201ENST00000362131 111 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 RNA5SP447-201ENST00000363749 119 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 RNU4-51P-201ENST00000364206 140 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 RNU6-549P-201ENST00000384433 107 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC097374.1-203ENST00000400783 485 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AL139095.3-201ENST00000419672 1203 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC011998.1-201ENST00000433403 117 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC002542.1-201ENST00000440683 193 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AL929288.2-201ENST00000446368 407 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC112492.1-201ENST00000449607 712 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 USP9YP25-201ENST00000457708 443 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 RPL35AP15-201ENST00000468042 339 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC104164.2-201ENST00000496953 495 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC091951.3-201ENST00000504093 246 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDH9Q9HC56 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.45□□□□□ -1.7
PCDH9Q9HC56 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms