Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 SNRPEP3-201ENST00000338402 276 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SOX4Q06945 Y_RNA.159-201ENST00000363674 87 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 Y_RNA.216-201ENST00000364205 93 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 GNG5P2-201ENST00000372054 207 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SOX4Q06945 RPL35AP24-201ENST00000413846 330 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 MTCO2P5-201ENST00000422621 426 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.04□□□□□ -1.44
SOX4Q06945 AC092651.1-201ENST00000426110 312 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 RPEP2-201ENST00000432149 701 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.04□□□□□ -1.44
SOX4Q06945 AC023347.2-201ENST00000433994 462 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 OR6D1P-201ENST00000436165 939 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX4Q06945 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC6.04□□□□□ -1.44
SOX4Q06945 CBWD4P-201ENST00000445695 655 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SOX4Q06945 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.04□□□□□ -1.44
SOX4Q06945 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX4Q06945 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX4Q06945 IGKV2D-10-201ENST00000520194 281 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC6.04□□□□□ -1.44
SOX4Q06945 AP005597.4-201ENST00000526762 229 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 PHBP17-201ENST00000528576 541 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.04□□□□□ -1.44
SOX4Q06945 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.04□□□□□ -1.44
SOX4Q06945 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.04□□□□□ -1.44
SOX4Q06945 AC034105.3-201ENST00000565294 442 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX4Q06945 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX4Q06945 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.04□□□□□ -1.44
SOX4Q06945 AC012616.1-201ENST00000600294 197 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 BCRP9-201ENST00000605312 388 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.04□□□□□ -1.44
SOX4Q06945 MIR98-201ENST00000606724 119 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX4Q06945 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX4Q06945 RMST_7.1-201ENST00000621935 268 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 MIR8080-201ENST00000622224 89 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SOX4Q06945 CKAP2P1-201ENST00000555477 2049 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SOX4Q06945 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.04□□□□□ -1.44
SOX4Q06945 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.04□□□□□ -1.44
SOX4Q06945 MTND5P3-201ENST00000438536 1800 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6.04□□□□□ -1.44
SOX4Q06945 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SOX4Q06945 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX4Q06945 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX4Q06945 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX4Q06945 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.03□□□□□ -1.44
SOX4Q06945 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SOX4Q06945 ZNF736P3Y-201ENST00000428264 1465 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SOX4Q06945 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX4Q06945 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX4Q06945 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
SOX4Q06945 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX4Q06945 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SOX4Q06945 AC108467.2-201ENST00000617640 1597 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
SOX4Q06945 IGKV7-3-201ENST00000357453 298 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 RNA5SP326-201ENST00000363209 110 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 RNU6-254P-201ENST00000363377 107 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 RNU6-777P-201ENST00000364265 104 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 SNORA63C-201ENST00000364578 129 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 AL451142.1-201ENST00000375867 775 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 RNU6-171P-201ENST00000384354 107 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 RNU6-769P-201ENST00000384407 104 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 MIR320B1-201ENST00000390209 79 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 RPL7P58-201ENST00000402913 758 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 AL354719.1-201ENST00000406535 843 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 MIR1305-201ENST00000408300 86 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 RN7SKP32-201ENST00000410167 303 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 RPL12P9-201ENST00000412942 488 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.03□□□□□ -1.44
SOX4Q06945 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.03□□□□□ -1.44
SOX4Q06945 AL353678.1-201ENST00000422735 741 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 SETP9-201ENST00000423837 832 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC6.03□□□□□ -1.44
SOX4Q06945 RPL22P17-201ENST00000438729 315 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC6.03□□□□□ -1.44
SOX4Q06945 BX842559.2-201ENST00000451418 605 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SOX4Q06945 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC6.03□□□□□ -1.44
SOX4Q06945 AC006499.2-201ENST00000513470 337 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
SOX4Q06945 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC6.03□□□□□ -1.44
SOX4Q06945 SUB1P2-201ENST00000556401 297 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC6.03□□□□□ -1.44
SOX4Q06945 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC6.03□□□□□ -1.44
SOX4Q06945 SNORD39.2-201ENST00000579995 76 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 MIR4311-201ENST00000580794 100 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.03□□□□□ -1.44
SOX4Q06945 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.03□□□□□ -1.44
SOX4Q06945 AC006504.6-201ENST00000590142 199 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.03□□□□□ -1.44
SOX4Q06945 AC068790.5-201ENST00000602741 355 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 AC104785.1-201ENST00000603220 588 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms