Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
H3F3AP84243 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.34□□□□□ -1.87
H3F3AP84243 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
H3F3AP84243 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
H3F3AP84243 RPL32P23-201ENST00000397237 405 ntBASIC3.34□□□□□ -1.87
H3F3AP84243 AL445189.1-201ENST00000405722 338 ntBASIC3.34□□□□□ -1.87
H3F3AP84243 AC010740.1-201ENST00000417035 684 ntBASIC3.34□□□□□ -1.87
H3F3AP84243 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.34□□□□□ -1.87
H3F3AP84243 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.34□□□□□ -1.87
H3F3AP84243 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
H3F3AP84243 AL139247.1-201ENST00000422768 325 ntBASIC3.34□□□□□ -1.87
H3F3AP84243 OR4F13P-201ENST00000428478 931 ntBASIC3.34□□□□□ -1.87
H3F3AP84243 DNAJC19P1-201ENST00000455312 319 ntBASIC3.34□□□□□ -1.87
H3F3AP84243 RN7SL93P-201ENST00000463035 293 ntBASIC3.34□□□□□ -1.87
H3F3AP84243 RPL9P32-201ENST00000464118 620 ntBASIC3.34□□□□□ -1.87
H3F3AP84243 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.34□□□□□ -1.87
H3F3AP84243 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.34□□□□□ -1.87
H3F3AP84243 RNU6-1231P-201ENST00000517185 103 ntBASIC3.34□□□□□ -1.87
H3F3AP84243 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.34□□□□□ -1.87
H3F3AP84243 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.34□□□□□ -1.87
H3F3AP84243 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.34□□□□□ -1.87
H3F3AP84243 BRDTP1-201ENST00000605735 677 ntBASIC3.34□□□□□ -1.87
H3F3AP84243 AC012213.4-201ENST00000606457 354 ntBASIC3.34□□□□□ -1.87
H3F3AP84243 AL391261.4-201ENST00000616012 481 ntBASIC3.34□□□□□ -1.87
H3F3AP84243 AC091905.1-201ENST00000624400 311 ntBASIC3.34□□□□□ -1.87
H3F3AP84243 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
H3F3AP84243 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
H3F3AP84243 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.34□□□□□ -1.88
H3F3AP84243 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.34□□□□□ -1.88
H3F3AP84243 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
H3F3AP84243 TNPO1P3-201ENST00000436471 2662 ntBASIC3.34□□□□□ -1.88
H3F3AP84243 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
H3F3AP84243 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.33□□□□□ -1.88
H3F3AP84243 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
H3F3AP84243 AC138393.1-206ENST00000540997 1886 ntBASIC3.33□□□□□ -1.88
H3F3AP84243 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
H3F3AP84243 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
H3F3AP84243 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.33□□□□□ -1.88
H3F3AP84243 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
H3F3AP84243 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
H3F3AP84243 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
H3F3AP84243 Y_RNA.62-201ENST00000362840 99 ntBASIC3.33□□□□□ -1.88
H3F3AP84243 RNU1-18P-201ENST00000363062 164 ntBASIC3.33□□□□□ -1.88
H3F3AP84243 U8.11-201ENST00000384699 133 ntBASIC3.33□□□□□ -1.88
H3F3AP84243 U8.12-201ENST00000384701 133 ntBASIC3.33□□□□□ -1.88
H3F3AP84243 ATP5F1P4-201ENST00000397288 746 ntBASIC3.33□□□□□ -1.88
H3F3AP84243 SNORA57.3-201ENST00000411095 141 ntBASIC3.33□□□□□ -1.88
H3F3AP84243 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
H3F3AP84243 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.33□□□□□ -1.88
H3F3AP84243 MTND2P15-201ENST00000418575 892 ntBASIC3.33□□□□□ -1.88
H3F3AP84243 RPL21P109-201ENST00000422213 475 ntBASIC3.33□□□□□ -1.88
H3F3AP84243 USP9YP7-201ENST00000436723 430 ntBASIC3.33□□□□□ -1.88
H3F3AP84243 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
H3F3AP84243 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.33□□□□□ -1.88
H3F3AP84243 RRM2P4-201ENST00000441721 562 ntBASIC3.33□□□□□ -1.88
H3F3AP84243 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.33□□□□□ -1.88
H3F3AP84243 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.33□□□□□ -1.88
H3F3AP84243 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.33□□□□□ -1.88
H3F3AP84243 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.33□□□□□ -1.88
H3F3AP84243 USP9YP32-201ENST00000452432 430 ntBASIC3.33□□□□□ -1.88
H3F3AP84243 ANP32BP2-201ENST00000454525 545 ntBASIC3.33□□□□□ -1.88
H3F3AP84243 U8.18-201ENST00000459285 133 ntBASIC3.33□□□□□ -1.88
H3F3AP84243 AC007688.1-201ENST00000475592 759 ntBASIC3.33□□□□□ -1.88
H3F3AP84243 AC091959.2-201ENST00000477363 321 ntBASIC3.33□□□□□ -1.88
H3F3AP84243 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.33□□□□□ -1.88
H3F3AP84243 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.33□□□□□ -1.88
H3F3AP84243 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.33□□□□□ -1.88
H3F3AP84243 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.33□□□□□ -1.88
H3F3AP84243 AC022790.1-201ENST00000522872 204 ntBASIC3.33□□□□□ -1.88
H3F3AP84243 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.33□□□□□ -1.88
H3F3AP84243 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
H3F3AP84243 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.33□□□□□ -1.88
H3F3AP84243 AC010680.4-201ENST00000605334 543 ntBASIC3.33□□□□□ -1.88
H3F3AP84243 AC123768.4-201ENST00000616244 701 ntBASIC3.33□□□□□ -1.88
H3F3AP84243 uc_338.9-201ENST00000617424 182 ntBASIC3.33□□□□□ -1.88
H3F3AP84243 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.33□□□□□ -1.88
H3F3AP84243 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.33□□□□□ -1.88
H3F3AP84243 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.33□□□□□ -1.88
H3F3AP84243 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.33□□□□□ -1.88
H3F3AP84243 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
H3F3AP84243 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
H3F3AP84243 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.32□□□□□ -1.88
H3F3AP84243 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
H3F3AP84243 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
H3F3AP84243 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.32□□□□□ -1.88
H3F3AP84243 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
H3F3AP84243 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
H3F3AP84243 RNU1-64P-201ENST00000365443 163 ntBASIC3.32□□□□□ -1.88
H3F3AP84243 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
H3F3AP84243 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
H3F3AP84243 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.32□□□□□ -1.88
H3F3AP84243 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
H3F3AP84243 NOTCH2P1-201ENST00000443481 624 ntBASIC3.32□□□□□ -1.88
H3F3AP84243 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
H3F3AP84243 MTCO3P16-201ENST00000454456 754 ntBASIC3.32□□□□□ -1.88
H3F3AP84243 RPL7L1P8-201ENST00000469911 741 ntBASIC3.32□□□□□ -1.88
H3F3AP84243 AC006511.1-201ENST00000470614 315 ntBASIC3.32□□□□□ -1.88
H3F3AP84243 AC020898.1-201ENST00000474167 787 ntBASIC3.32□□□□□ -1.88
H3F3AP84243 AP001960.1-201ENST00000506494 658 ntBASIC3.32□□□□□ -1.88
H3F3AP84243 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms