Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH11P55287 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH11P55287 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH11P55287 EEF1A1P39-201ENST00000440791 250 ntBASIC4.09□□□□□ -1.75
CDH11P55287 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH11P55287 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH11P55287 CEACAMP6-201ENST00000452007 574 ntBASIC4.09□□□□□ -1.75
CDH11P55287 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH11P55287 RPL5P30-201ENST00000465511 891 ntBASIC4.09□□□□□ -1.75
CDH11P55287 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH11P55287 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH11P55287 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.09□□□□□ -1.75
CDH11P55287 GAPDHP39-201ENST00000481866 979 ntBASIC4.09□□□□□ -1.75
CDH11P55287 RPS27P23-201ENST00000487608 251 ntBASIC4.09□□□□□ -1.75
CDH11P55287 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH11P55287 AC021146.5-201ENST00000503544 545 ntBASIC4.09□□□□□ -1.75
CDH11P55287 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDH11P55287 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH11P55287 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH11P55287 IGBP1P5-201ENST00000507524 1000 ntBASIC4.09□□□□□ -1.75
CDH11P55287 AC118282.2-201ENST00000508739 374 ntBASIC4.09□□□□□ -1.75
CDH11P55287 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH11P55287 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.09□□□□□ -1.75
CDH11P55287 RN7SKP283-201ENST00000517197 270 ntBASIC4.09□□□□□ -1.75
CDH11P55287 AC023632.1-201ENST00000518463 375 ntBASIC4.09□□□□□ -1.75
CDH11P55287 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH11P55287 C1GALT1P3-201ENST00000522049 819 ntBASIC4.09□□□□□ -1.75
CDH11P55287 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH11P55287 AC092747.2-201ENST00000545069 983 ntBASIC4.09□□□□□ -1.75
CDH11P55287 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.09□□□□□ -1.75
CDH11P55287 MTND4P33-201ENST00000556706 766 ntBASIC4.09□□□□□ -1.75
CDH11P55287 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.09□□□□□ -1.75
CDH11P55287 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH11P55287 AC009097.3-201ENST00000563557 1018 ntBASIC4.09□□□□□ -1.75
CDH11P55287 AC023813.2-201ENST00000564321 469 ntBASIC4.09□□□□□ -1.75
CDH11P55287 RN7SL652P-201ENST00000577769 300 ntBASIC4.09□□□□□ -1.75
CDH11P55287 MIR4284-201ENST00000578924 81 ntBASIC4.09□□□□□ -1.75
CDH11P55287 MIR5096-201ENST00000583713 70 ntBASIC4.09□□□□□ -1.75
CDH11P55287 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.09□□□□□ -1.75
CDH11P55287 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH11P55287 AC093765.1-201ENST00000603758 881 ntBASIC4.09□□□□□ -1.75
CDH11P55287 AL355493.4-201ENST00000618530 292 ntBASIC4.09□□□□□ -1.75
CDH11P55287 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH11P55287 AP002791.1-201ENST00000623291 381 ntBASIC4.09□□□□□ -1.75
CDH11P55287 AL356121.2-201ENST00000624715 780 ntBASIC4.09□□□□□ -1.75
CDH11P55287 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.09□□□□□ -1.75
CDH11P55287 CDRT1-208ENST00000630868 794 ntBASIC4.09□□□□□ -1.75
CDH11P55287 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CDH11P55287 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CDH11P55287 OR2L1P-202ENST00000641567 1023 ntBASIC4.09□□□□□ -1.75
CDH11P55287 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CDH11P55287 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDH11P55287 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDH11P55287 SGO1P1-201ENST00000603525 1447 ntBASIC4.09□□□□□ -1.75
CDH11P55287 AL353743.4-201ENST00000422653 1547 ntBASIC4.09□□□□□ -1.75
CDH11P55287 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
CDH11P55287 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
CDH11P55287 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CDH11P55287 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CDH11P55287 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
CDH11P55287 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH11P55287 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CDH11P55287 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH11P55287 RNU6-636P-201ENST00000384598 107 ntBASIC4.08□□□□□ -1.76
CDH11P55287 ERHP2-201ENST00000402323 299 ntBASIC4.08□□□□□ -1.76
CDH11P55287 MTCO2P31-201ENST00000402702 684 ntBASIC4.08□□□□□ -1.76
CDH11P55287 AL049697.2-201ENST00000403708 294 ntBASIC4.08□□□□□ -1.76
CDH11P55287 Z98755.1-201ENST00000407015 1384 ntBASIC4.08□□□□□ -1.76
CDH11P55287 RNU2-65P-201ENST00000410162 185 ntBASIC4.08□□□□□ -1.76
CDH11P55287 OR51A3P-201ENST00000413596 924 ntBASIC4.08□□□□□ -1.76
CDH11P55287 RPS24P7-201ENST00000416921 246 ntBASIC4.08□□□□□ -1.76
CDH11P55287 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.08□□□□□ -1.76
CDH11P55287 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH11P55287 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH11P55287 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH11P55287 RPL21P110-201ENST00000433345 446 ntBASIC4.08□□□□□ -1.76
CDH11P55287 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH11P55287 ACTR3P2-201ENST00000439585 1257 ntBASIC4.08□□□□□ -1.76
CDH11P55287 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.08□□□□□ -1.76
CDH11P55287 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH11P55287 MTND4P10-201ENST00000446199 1363 ntBASIC4.08□□□□□ -1.76
CDH11P55287 AC108463.1-201ENST00000450258 347 ntBASIC4.08□□□□□ -1.76
CDH11P55287 AC233982.1-201ENST00000451247 436 ntBASIC4.08□□□□□ -1.76
CDH11P55287 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH11P55287 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.08□□□□□ -1.76
CDH11P55287 MTND2P28-201ENST00000457540 1044 ntBASIC4.08□□□□□ -1.76
CDH11P55287 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH11P55287 AC005410.1-202ENST00000460347 485 ntBASIC4.08□□□□□ -1.76
CDH11P55287 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH11P55287 MTCO2P6-201ENST00000463134 685 ntBASIC4.08□□□□□ -1.76
CDH11P55287 AC139769.1-204ENST00000472297 1931 ntBASIC4.08□□□□□ -1.76
CDH11P55287 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH11P55287 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDH11P55287 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH11P55287 AC069528.1-202ENST00000482888 637 ntBASIC4.08□□□□□ -1.76
CDH11P55287 RPL36AP41-201ENST00000493820 306 ntBASIC4.08□□□□□ -1.76
CDH11P55287 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.08□□□□□ -1.76
CDH11P55287 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH11P55287 AC015795.1-201ENST00000513669 327 ntBASIC4.08□□□□□ -1.76
CDH11P55287 MYL12AP1-201ENST00000518490 515 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms