Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL355802.4-201ENST00000607635 548 ntBASIC4.31□□□□□ -1.72
HMGCS2P54868 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.31□□□□□ -1.72
HMGCS2P54868 AC103798.2-201ENST00000624292 632 ntBASIC4.31□□□□□ -1.72
HMGCS2P54868 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.31□□□□□ -1.72
HMGCS2P54868 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HMGCS2P54868 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.31□□□□□ -1.72
HMGCS2P54868 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HMGCS2P54868 DDX18P3-201ENST00000404856 2007 ntBASIC4.31□□□□□ -1.72
HMGCS2P54868 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
HMGCS2P54868 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGCS2P54868 AC090337.1-201ENST00000579651 2074 ntBASIC4.3□□□□□ -1.72
HMGCS2P54868 RNA5SP267-201ENST00000364893 126 ntBASIC4.3□□□□□ -1.72
HMGCS2P54868 RNU6-40P-201ENST00000384254 107 ntBASIC4.3□□□□□ -1.72
HMGCS2P54868 AL034374.1-201ENST00000406329 351 ntBASIC4.3□□□□□ -1.72
HMGCS2P54868 MTND4LP14-201ENST00000429447 288 ntBASIC4.3□□□□□ -1.72
HMGCS2P54868 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGCS2P54868 MTND6P18-201ENST00000439477 513 ntBASIC4.3□□□□□ -1.72
HMGCS2P54868 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.3□□□□□ -1.72
HMGCS2P54868 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGCS2P54868 BUD31P2-201ENST00000449374 300 ntBASIC4.3□□□□□ -1.72
HMGCS2P54868 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGCS2P54868 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.3□□□□□ -1.72
HMGCS2P54868 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HMGCS2P54868 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
HMGCS2P54868 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.3□□□□□ -1.72
HMGCS2P54868 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGCS2P54868 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGCS2P54868 IGHV3-63-201ENST00000518422 341 ntBASIC4.3□□□□□ -1.72
HMGCS2P54868 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.3□□□□□ -1.72
HMGCS2P54868 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGCS2P54868 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGCS2P54868 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.3□□□□□ -1.72
HMGCS2P54868 NPM1P35-201ENST00000533043 868 ntBASIC4.3□□□□□ -1.72
HMGCS2P54868 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGCS2P54868 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGCS2P54868 AC068020.1-201ENST00000594215 661 ntBASIC4.3□□□□□ -1.72
HMGCS2P54868 MIMT1-201ENST00000597105 1050 ntBASIC4.3□□□□□ -1.72
HMGCS2P54868 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGCS2P54868 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.3□□□□□ -1.72
HMGCS2P54868 AL356490.1-201ENST00000623079 479 ntBASIC4.3□□□□□ -1.72
HMGCS2P54868 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGCS2P54868 AC055839.1-201ENST00000634467 498 ntBASIC4.3□□□□□ -1.72
HMGCS2P54868 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HMGCS2P54868 DDX18P4-201ENST00000511690 1966 ntBASIC4.3□□□□□ -1.72
HMGCS2P54868 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
HMGCS2P54868 AC010329.2-201ENST00000595195 2737 ntBASIC4.3□□□□□ -1.72
HMGCS2P54868 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGCS2P54868 AL365440.1-201ENST00000436135 2167 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HMGCS2P54868 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HMGCS2P54868 RNA5SP50-201ENST00000363731 107 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 RNU6-225P-201ENST00000384613 103 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 MT-TP-201ENST00000387461 68 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HMGCS2P54868 GSTM3P2-201ENST00000412746 530 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGCS2P54868 AC099336.2-201ENST00000422457 254 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 AL158156.1-201ENST00000422509 473 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 AL391219.1-201ENST00000422570 483 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 DYNLL1P7-201ENST00000429273 258 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 AC092447.2-201ENST00000435487 669 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 CACYBPP1-201ENST00000438592 684 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 CALM1P2-201ENST00000452941 448 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 AC099560.2-201ENST00000457554 255 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGCS2P54868 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGCS2P54868 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGCS2P54868 SETP12-201ENST00000514068 805 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 TCP11X3P-202ENST00000514289 1254 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGCS2P54868 OR5M7P-201ENST00000526140 972 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HMGCS2P54868 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HMGCS2P54868 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.29□□□□□ -1.72
HMGCS2P54868 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.29□□□□□ -1.72
HMGCS2P54868 AC090877.1-201ENST00000561418 344 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGCS2P54868 ZNF415P1-201ENST00000582279 1166 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
HMGCS2P54868 OR4H6P-202ENST00000603819 340 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGCS2P54868 AL669942.2-201ENST00000620352 697 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 AC145207.9-201ENST00000623802 325 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 AP001002.2-201ENST00000625137 386 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.29□□□□□ -1.72
HMGCS2P54868 ATE1-AS1-202ENST00000636460 506 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HMGCS2P54868 AC093535.2-201ENST00000624769 2326 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 AC011266.1-201ENST00000624119 3569 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 AC092079.1-201ENST00000558620 1985 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HMGCS2P54868 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
HMGCS2P54868 DDX6P1-205ENST00000441966 1436 ntBASIC4.29□□□□□ -1.72
HMGCS2P54868 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.29□□□□□ -1.72
HMGCS2P54868 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGCS2P54868 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.29□□□□□ -1.72
HMGCS2P54868 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
HMGCS2P54868 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HMGCS2P54868 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HMGCS2P54868 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms