Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RNU2-6P-201ENST00000411404 190 ntBASIC4.37□□□□□ -1.71
LHX1P48742 HSPE1P12-201ENST00000412576 301 ntBASIC4.37□□□□□ -1.71
LHX1P48742 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LHX1P48742 OR5AW1P-201ENST00000426334 1006 ntBASIC4.37□□□□□ -1.71
LHX1P48742 AL117339.2-201ENST00000430475 180 ntBASIC4.37□□□□□ -1.71
LHX1P48742 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.37□□□□□ -1.71
LHX1P48742 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.37□□□□□ -1.71
LHX1P48742 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.37□□□□□ -1.71
LHX1P48742 MTATP6P14-201ENST00000455189 673 ntBASIC4.37□□□□□ -1.71
LHX1P48742 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.37□□□□□ -1.71
LHX1P48742 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.37□□□□□ -1.71
LHX1P48742 RN7SKP283-201ENST00000517197 270 ntBASIC4.37□□□□□ -1.71
LHX1P48742 AC008562.1-201ENST00000521763 330 ntBASIC4.37□□□□□ -1.71
LHX1P48742 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.37□□□□□ -1.71
LHX1P48742 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.37□□□□□ -1.71
LHX1P48742 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.37□□□□□ -1.71
LHX1P48742 YWHAZP1-201ENST00000556286 722 ntBASIC4.37□□□□□ -1.71
LHX1P48742 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.37□□□□□ -1.71
LHX1P48742 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.37□□□□□ -1.71
LHX1P48742 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.37□□□□□ -1.71
LHX1P48742 MIR5684-201ENST00000585074 65 ntBASIC4.37□□□□□ -1.71
LHX1P48742 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LHX1P48742 PCNAP1-202ENST00000595299 752 ntBASIC4.37□□□□□ -1.71
LHX1P48742 NTAN1P1-201ENST00000603150 646 ntBASIC4.37□□□□□ -1.71
LHX1P48742 AP002802.2-201ENST00000605877 235 ntBASIC4.37□□□□□ -1.71
LHX1P48742 MIR432-201ENST00000606207 94 ntBASIC4.37□□□□□ -1.71
LHX1P48742 AC064801.1-201ENST00000612025 407 ntBASIC4.37□□□□□ -1.71
LHX1P48742 AC123768.4-201ENST00000616244 701 ntBASIC4.37□□□□□ -1.71
LHX1P48742 AL590396.4-201ENST00000636779 956 ntBASIC4.37□□□□□ -1.71
LHX1P48742 AC013437.2-201ENST00000639587 677 ntBASIC4.37□□□□□ -1.71
LHX1P48742 AC134882.1-201ENST00000603738 1676 ntBASIC4.37□□□□□ -1.71
LHX1P48742 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.37□□□□□ -1.71
LHX1P48742 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
LHX1P48742 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.37□□□□□ -1.71
LHX1P48742 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LHX1P48742 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.36□□□□□ -1.71
LHX1P48742 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
LHX1P48742 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
LHX1P48742 OR52B1P-201ENST00000316506 909 ntBASIC4.36□□□□□ -1.71
LHX1P48742 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LHX1P48742 RNA5SP479-201ENST00000364858 117 ntBASIC4.36□□□□□ -1.71
LHX1P48742 RNU6-146P-201ENST00000384602 108 ntBASIC4.36□□□□□ -1.71
LHX1P48742 RSL24D1P1-201ENST00000404972 493 ntBASIC4.36□□□□□ -1.71
LHX1P48742 RPL21P65-201ENST00000406094 466 ntBASIC4.36□□□□□ -1.71
LHX1P48742 SNORA11C-201ENST00000408532 129 ntBASIC4.36□□□□□ -1.71
LHX1P48742 AC114814.2-201ENST00000419195 485 ntBASIC4.36□□□□□ -1.71
LHX1P48742 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.36□□□□□ -1.71
LHX1P48742 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.36□□□□□ -1.71
LHX1P48742 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.36□□□□□ -1.71
LHX1P48742 RPL12P46-201ENST00000436610 195 ntBASIC4.36□□□□□ -1.71
LHX1P48742 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.36□□□□□ -1.71
LHX1P48742 SEPT14P24-201ENST00000447236 180 ntBASIC4.36□□□□□ -1.71
LHX1P48742 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.36□□□□□ -1.71
LHX1P48742 SUMO2P5-201ENST00000506790 245 ntBASIC4.36□□□□□ -1.71
LHX1P48742 AC108064.1-201ENST00000513791 460 ntBASIC4.36□□□□□ -1.71
LHX1P48742 IGLV3-26-201ENST00000520756 302 ntBASIC4.36□□□□□ -1.71
LHX1P48742 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.36□□□□□ -1.71
LHX1P48742 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.36□□□□□ -1.71
LHX1P48742 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.36□□□□□ -1.71
LHX1P48742 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.36□□□□□ -1.71
LHX1P48742 BNIP3P5-201ENST00000562290 498 ntBASIC4.36□□□□□ -1.71
LHX1P48742 AGGF1P6-201ENST00000569213 976 ntBASIC4.36□□□□□ -1.71
LHX1P48742 AL121834.1-201ENST00000572284 509 ntBASIC4.36□□□□□ -1.71
LHX1P48742 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.36□□□□□ -1.71
LHX1P48742 VN1R87P-201ENST00000596706 487 ntBASIC4.36□□□□□ -1.71
LHX1P48742 VN1R85P-201ENST00000601587 426 ntBASIC4.36□□□□□ -1.71
LHX1P48742 AP003117.1-201ENST00000602771 554 ntBASIC4.36□□□□□ -1.71
LHX1P48742 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.36□□□□□ -1.71
LHX1P48742 BNIP3P4-201ENST00000604946 565 ntBASIC4.36□□□□□ -1.71
LHX1P48742 AC090948.2-201ENST00000607363 564 ntBASIC4.36□□□□□ -1.71
LHX1P48742 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.36□□□□□ -1.71
LHX1P48742 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LHX1P48742 AC024941.1-201ENST00000612250 334 ntBASIC4.36□□□□□ -1.71
LHX1P48742 SNX18P1Y-201ENST00000616231 511 ntBASIC4.36□□□□□ -1.71
LHX1P48742 AC092608.3-201ENST00000625017 386 ntBASIC4.36□□□□□ -1.71
LHX1P48742 AC055839.1-201ENST00000634467 498 ntBASIC4.36□□□□□ -1.71
LHX1P48742 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LHX1P48742 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
LHX1P48742 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.36□□□□□ -1.71
LHX1P48742 IQCB2P-201ENST00000401788 1633 ntBASIC4.35□□□□□ -1.71
LHX1P48742 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LHX1P48742 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
LHX1P48742 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
LHX1P48742 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
LHX1P48742 AC046144.1-201ENST00000478559 1853 ntBASIC4.35□□□□□ -1.71
LHX1P48742 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
LHX1P48742 LINC01355-201ENST00000566551 5444 ntBASIC4.35□□□□□ -1.71
LHX1P48742 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LHX1P48742 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
LHX1P48742 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
LHX1P48742 MIR372-201ENST00000362225 67 ntBASIC4.35□□□□□ -1.71
LHX1P48742 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.35□□□□□ -1.71
LHX1P48742 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.35□□□□□ -1.71
LHX1P48742 AL358472.1-201ENST00000431295 329 ntBASIC4.35□□□□□ -1.71
LHX1P48742 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LHX1P48742 AC002542.1-201ENST00000440683 193 ntBASIC4.35□□□□□ -1.71
LHX1P48742 AC092809.1-201ENST00000441469 474 ntBASIC4.35□□□□□ -1.71
LHX1P48742 RPS4XP4-201ENST00000443195 763 ntBASIC4.35□□□□□ -1.71
LHX1P48742 RPS26P30-201ENST00000443431 335 ntBASIC4.35□□□□□ -1.71
LHX1P48742 AC005002.1-201ENST00000447458 540 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms