Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.57□□□□□ -1.68
HADHAP40939 AC245884.10-201ENST00000597355 337 ntBASIC4.57□□□□□ -1.68
HADHAP40939 AL020997.3-201ENST00000602843 359 ntBASIC4.57□□□□□ -1.68
HADHAP40939 AL390816.3-201ENST00000604527 1066 ntBASIC4.57□□□□□ -1.68
HADHAP40939 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.57□□□□□ -1.68
HADHAP40939 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HADHAP40939 PART1_2.1-201ENST00000612397 250 ntBASIC4.57□□□□□ -1.68
HADHAP40939 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HADHAP40939 AC123767.1-202ENST00000620407 817 ntBASIC4.57□□□□□ -1.68
HADHAP40939 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.57□□□□□ -1.68
HADHAP40939 OR4G3P-201ENST00000633500 913 ntBASIC4.57□□□□□ -1.68
HADHAP40939 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HADHAP40939 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
HADHAP40939 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HADHAP40939 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.56□□□□□ -1.68
HADHAP40939 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
HADHAP40939 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
HADHAP40939 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.56□□□□□ -1.68
HADHAP40939 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
HADHAP40939 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.56□□□□□ -1.68
HADHAP40939 U3.15-201ENST00000365398 212 ntBASIC4.56□□□□□ -1.68
HADHAP40939 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.56□□□□□ -1.68
HADHAP40939 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.56□□□□□ -1.68
HADHAP40939 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HADHAP40939 AL121978.1-201ENST00000402778 359 ntBASIC4.56□□□□□ -1.68
HADHAP40939 AL078604.1-201ENST00000404609 466 ntBASIC4.56□□□□□ -1.68
HADHAP40939 RNU2-21P-201ENST00000410368 188 ntBASIC4.56□□□□□ -1.68
HADHAP40939 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.56□□□□□ -1.68
HADHAP40939 RPS12P23-201ENST00000419579 400 ntBASIC4.56□□□□□ -1.68
HADHAP40939 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.56□□□□□ -1.68
HADHAP40939 RPF2P1-201ENST00000424137 906 ntBASIC4.56□□□□□ -1.68
HADHAP40939 CENPIP1-201ENST00000425713 902 ntBASIC4.56□□□□□ -1.68
HADHAP40939 DNAJC19P7-201ENST00000428811 344 ntBASIC4.56□□□□□ -1.68
HADHAP40939 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.56□□□□□ -1.68
HADHAP40939 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.56□□□□□ -1.68
HADHAP40939 PPIAP17-201ENST00000438507 471 ntBASIC4.56□□□□□ -1.68
HADHAP40939 RPL36AP15-201ENST00000444514 266 ntBASIC4.56□□□□□ -1.68
HADHAP40939 HMGB3P6-201ENST00000444896 598 ntBASIC4.56□□□□□ -1.68
HADHAP40939 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.56□□□□□ -1.68
HADHAP40939 AC009220.1-201ENST00000451614 275 ntBASIC4.56□□□□□ -1.68
HADHAP40939 TVP23BP2-201ENST00000455082 615 ntBASIC4.56□□□□□ -1.68
HADHAP40939 RPS15AP1-201ENST00000457423 391 ntBASIC4.56□□□□□ -1.68
HADHAP40939 snoU13.7-201ENST00000459220 104 ntBASIC4.56□□□□□ -1.68
HADHAP40939 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.56□□□□□ -1.68
HADHAP40939 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.56□□□□□ -1.68
HADHAP40939 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.56□□□□□ -1.68
HADHAP40939 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.56□□□□□ -1.68
HADHAP40939 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.56□□□□□ -1.68
HADHAP40939 AC093752.1-206ENST00000511823 336 ntBASIC4.56□□□□□ -1.68
HADHAP40939 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.56□□□□□ -1.68
HADHAP40939 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.56□□□□□ -1.68
HADHAP40939 RNU6-202P-201ENST00000515998 96 ntBASIC4.56□□□□□ -1.68
HADHAP40939 SNORA19.3-201ENST00000516165 130 ntBASIC4.56□□□□□ -1.68
HADHAP40939 RN7SKP157-201ENST00000516174 282 ntBASIC4.56□□□□□ -1.68
HADHAP40939 AC008694.2-201ENST00000517591 306 ntBASIC4.56□□□□□ -1.68
HADHAP40939 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.56□□□□□ -1.68
HADHAP40939 RAB9BP1-201ENST00000519581 626 ntBASIC4.56□□□□□ -1.68
HADHAP40939 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.56□□□□□ -1.68
HADHAP40939 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.56□□□□□ -1.68
HADHAP40939 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.56□□□□□ -1.68
HADHAP40939 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.56□□□□□ -1.68
HADHAP40939 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.56□□□□□ -1.68
HADHAP40939 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HADHAP40939 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.56□□□□□ -1.68
HADHAP40939 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.56□□□□□ -1.68
HADHAP40939 AC068790.7-201ENST00000602347 528 ntBASIC4.56□□□□□ -1.68
HADHAP40939 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.56□□□□□ -1.68
HADHAP40939 RPL26P30-202ENST00000602923 645 ntBASIC4.56□□□□□ -1.68
HADHAP40939 BPIFA4P-203ENST00000603168 689 ntBASIC4.56□□□□□ -1.68
HADHAP40939 AC105148.1-201ENST00000604961 409 ntBASIC4.56□□□□□ -1.68
HADHAP40939 AP002360.3-201ENST00000607673 710 ntBASIC4.56□□□□□ -1.68
HADHAP40939 AP005137.2-201ENST00000609238 400 ntBASIC4.56□□□□□ -1.68
HADHAP40939 AC090912.3-201ENST00000609775 533 ntBASIC4.56□□□□□ -1.68
HADHAP40939 SNX18P1Y-201ENST00000616231 511 ntBASIC4.56□□□□□ -1.68
HADHAP40939 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.56□□□□□ -1.68
HADHAP40939 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
HADHAP40939 AL157770.1-201ENST00000623049 439 ntBASIC4.56□□□□□ -1.68
HADHAP40939 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.56□□□□□ -1.68
HADHAP40939 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HADHAP40939 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HADHAP40939 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.56□□□□□ -1.68
HADHAP40939 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.56□□□□□ -1.68
HADHAP40939 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HADHAP40939 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HADHAP40939 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HADHAP40939 MTND4P26-201ENST00000415971 1359 ntBASIC4.55□□□□□ -1.68
HADHAP40939 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HADHAP40939 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HADHAP40939 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.55□□□□□ -1.68
HADHAP40939 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HADHAP40939 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.55□□□□□ -1.68
HADHAP40939 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HADHAP40939 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HADHAP40939 AC021146.4-201ENST00000309229 279 ntBASIC4.55□□□□□ -1.68
HADHAP40939 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.55□□□□□ -1.68
HADHAP40939 RN7SKP44-201ENST00000363602 316 ntBASIC4.55□□□□□ -1.68
HADHAP40939 RNU1-32P-201ENST00000363937 159 ntBASIC4.55□□□□□ -1.68
HADHAP40939 RNA5SP151-201ENST00000365632 117 ntBASIC4.55□□□□□ -1.68
HADHAP40939 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HADHAP40939 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms