Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 DUX4L52-201ENST00000549363 777 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 AC095057.3-201ENST00000567102 1157 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 AC006362.1-201ENST00000567392 174 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 ZNF415P1-201ENST00000582279 1166 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DOAP06340 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 AC006539.2-201ENST00000601729 572 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 MIR6716-201ENST00000613413 80 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 FP325313.1-201ENST00000638228 703 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 DHX9P1-201ENST00000436565 3076 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DOAP06340 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DOAP06340 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DOAP06340 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 TTC39DP-201ENST00000416781 1688 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DOAP06340 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 AL731566.1-201ENST00000620490 1937 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DOAP06340 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DOAP06340 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DOAP06340 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HLA-DOAP06340 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HLA-DOAP06340 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HLA-DOAP06340 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DOAP06340 AL356967.1-201ENST00000406305 431 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DOAP06340 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DOAP06340 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.36□□□□□ -1.55
HLA-DOAP06340 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DOAP06340 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DOAP06340 RPL23AP4-201ENST00000427757 463 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 AC244035.1-201ENST00000430042 390 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DOAP06340 RPS29P17-201ENST00000430795 166 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DOAP06340 AL353093.1-201ENST00000441292 436 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 AL591503.2-201ENST00000442314 1005 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 MTCO1P19-201ENST00000443487 500 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DOAP06340 ARL5AP2-201ENST00000444698 533 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DOAP06340 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HLA-DOAP06340 RN7SL303P-201ENST00000469773 251 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 AC010618.1-201ENST00000469924 477 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.36□□□□□ -1.55
HLA-DOAP06340 AC092045.1-201ENST00000495716 1231 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DOAP06340 AC010460.1-201ENST00000507087 466 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DOAP06340 AC026782.2-201ENST00000510845 636 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 RNA5SP464-201ENST00000516251 108 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 AL121766.1-201ENST00000547436 487 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.36□□□□□ -1.55
HLA-DOAP06340 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DOAP06340 MTATP6P3-201ENST00000581686 676 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 MIR4999-201ENST00000585029 91 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DOAP06340 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DOAP06340 AC073648.5-201ENST00000603502 305 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 DUXAP11-201ENST00000603858 526 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DOAP06340 AC241377.1-201ENST00000619797 406 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 AC009120.7-201ENST00000623452 780 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 OR52H1-202ENST00000641796 1061 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 AC133552.1-201ENST00000569988 4007 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DOAP06340 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DOAP06340 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DOAP06340 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.36□□□□□ -1.55
HLA-DOAP06340 MAPK10-286ENST00000641208 8747 ntBASIC5.36□□□□□ -1.55
HLA-DOAP06340 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
HLA-DOAP06340 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.35□□□□□ -1.55
HLA-DOAP06340 SALL4P2-201ENST00000423288 2910 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DOAP06340 AL355852.1-201ENST00000454081 1771 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
HLA-DOAP06340 AC027514.1-201ENST00000588561 1603 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DOAP06340 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
HLA-DOAP06340 ENSAP3-201ENST00000312710 333 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HLA-DOAP06340 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-DOAP06340 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-DOAP06340 RNU6-1200P-201ENST00000384162 107 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 OR6C69P-201ENST00000394268 893 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.35□□□□□ -1.55
HLA-DOAP06340 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-DOAP06340 MTND3P1-201ENST00000441336 220 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 PHBP16-201ENST00000446318 950 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 RN7SL98P-201ENST00000462271 300 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 AC103987.1-201ENST00000473394 348 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 AC020890.1-201ENST00000491837 504 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms