Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN9O95484 AC007000.2-201ENST00000442564 487 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 ARL5AP2-201ENST00000444698 533 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 RPS15AP29-201ENST00000445539 400 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 AC069540.1-201ENST00000446320 988 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 RPS17P13-201ENST00000448974 407 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 MTND2P6-201ENST00000455337 1030 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 RPL23AP71-201ENST00000470966 469 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 AC146944.2-203ENST00000502493 354 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN9O95484 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN9O95484 AC110792.2-201ENST00000510278 224 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 AC139495.1-202ENST00000513164 354 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 RNU6-362P-201ENST00000516736 90 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN9O95484 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN9O95484 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN9O95484 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN9O95484 OR4A12P-201ENST00000530847 918 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN9O95484 AC135001.1-201ENST00000544546 283 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN9O95484 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN9O95484 AC090751.1-201ENST00000566966 267 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 AC136624.4-201ENST00000573044 370 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN9O95484 CCDC58P3-201ENST00000590792 430 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 AC011374.2-201ENST00000607135 526 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 AC004775.1-201ENST00000607389 753 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 AC012467.1-201ENST00000607740 256 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 OR6R2P-201ENST00000609216 300 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 MIR486-1-201ENST00000612171 68 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 AC243756.2-201ENST00000618406 463 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN9O95484 CDRT1-208ENST00000630868 794 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN9O95484 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN9O95484 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN9O95484 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN9O95484 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN9O95484 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN9O95484 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN9O95484 AL031985.3-201ENST00000565390 2449 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN9O95484 AL121657.1-201ENST00000327215 531 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CLDN9O95484 RNU1-85P-201ENST00000364127 164 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 U3.15-201ENST00000365398 212 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 RPS26P8-201ENST00000393490 348 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 HLFP1-201ENST00000402375 499 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 ZNF603P-201ENST00000405613 487 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 SNORA11C-201ENST00000408532 129 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 RNU4-6P-201ENST00000410804 122 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN9O95484 OR8G2P-201ENST00000412796 908 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN9O95484 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN9O95484 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN9O95484 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.78□□□□□ -1.8
CLDN9O95484 AC004975.1-201ENST00000428733 208 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 NPM1P34-201ENST00000428821 893 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN9O95484 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN9O95484 TBCAP1-201ENST00000436520 327 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 AF228730.2-201ENST00000438784 848 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 AC006326.1-201ENST00000445465 787 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.78□□□□□ -1.8
CLDN9O95484 AC092685.1-201ENST00000447960 1243 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN9O95484 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN9O95484 RPL23AP23-201ENST00000452590 471 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN9O95484 AC096992.1-201ENST00000459808 709 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 RPL21P11-201ENST00000461458 483 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN9O95484 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN9O95484 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.78□□□□□ -1.8
CLDN9O95484 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN9O95484 AC087369.1-201ENST00000520775 996 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN9O95484 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN9O95484 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN9O95484 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN9O95484 YPEL5P3-201ENST00000547227 352 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.78□□□□□ -1.8
CLDN9O95484 AC093014.1-201ENST00000548926 724 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 AC025884.1-201ENST00000556034 378 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 BNIP3P5-201ENST00000562290 498 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN9O95484 AP001180.3-201ENST00000582221 145 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN9O95484 EIF1P6-201ENST00000600054 334 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 AC079610.2-201ENST00000604818 690 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 AC135178.6-201ENST00000605314 398 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN9O95484 MIR6716-201ENST00000613413 80 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 AC099669.2-201ENST00000616549 437 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms