Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC017079.2-201ENST00000416102 485 ntBASIC2.8□□□□□ -1.96
SSSCA1O60232 AL139247.1-201ENST00000422768 325 ntBASIC2.8□□□□□ -1.96
SSSCA1O60232 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.8□□□□□ -1.96
SSSCA1O60232 RPL23AP22-201ENST00000437556 453 ntBASIC2.8□□□□□ -1.96
SSSCA1O60232 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.8□□□□□ -1.96
SSSCA1O60232 AC006326.1-201ENST00000445465 787 ntBASIC2.8□□□□□ -1.96
SSSCA1O60232 AC008264.1-201ENST00000447612 367 ntBASIC2.8□□□□□ -1.96
SSSCA1O60232 AC097262.1-201ENST00000452559 548 ntBASIC2.8□□□□□ -1.96
SSSCA1O60232 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC2.8□□□□□ -1.96
SSSCA1O60232 MTND6P6-201ENST00000478031 263 ntBASIC2.8□□□□□ -1.96
SSSCA1O60232 RPL23AP44-201ENST00000482216 473 ntBASIC2.8□□□□□ -1.96
SSSCA1O60232 AC007686.1-201ENST00000488511 463 ntBASIC2.8□□□□□ -1.96
SSSCA1O60232 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC2.8□□□□□ -1.96
SSSCA1O60232 PHBP14-201ENST00000512887 367 ntBASIC2.8□□□□□ -1.96
SSSCA1O60232 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SSSCA1O60232 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.8□□□□□ -1.96
SSSCA1O60232 NAT2-202ENST00000520116 716 ntTSL 3 BASIC2.8□□□□□ -1.96
SSSCA1O60232 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
SSSCA1O60232 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.8□□□□□ -1.96
SSSCA1O60232 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC2.8□□□□□ -1.96
SSSCA1O60232 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC2.8□□□□□ -1.96
SSSCA1O60232 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SSSCA1O60232 VN1R84P-201ENST00000593697 235 ntBASIC2.8□□□□□ -1.96
SSSCA1O60232 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SSSCA1O60232 AC069209.1-201ENST00000619282 651 ntBASIC2.8□□□□□ -1.96
SSSCA1O60232 AC112200.1-201ENST00000625015 234 ntBASIC2.8□□□□□ -1.96
SSSCA1O60232 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.8□□□□□ -1.96
SSSCA1O60232 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC2.8□□□□□ -1.96
SSSCA1O60232 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
SSSCA1O60232 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SSSCA1O60232 AF127577.6-201ENST00000623352 2191 ntBASIC2.8□□□□□ -1.96
SSSCA1O60232 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.79□□□□□ -1.96
SSSCA1O60232 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SSSCA1O60232 ELL2P4-201ENST00000446870 1376 ntBASIC2.79□□□□□ -1.96
SSSCA1O60232 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SSSCA1O60232 RPL7P26-201ENST00000333817 754 ntBASIC2.79□□□□□ -1.96
SSSCA1O60232 RBMY2KP-201ENST00000418221 992 ntBASIC2.79□□□□□ -1.96
SSSCA1O60232 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC2.79□□□□□ -1.96
SSSCA1O60232 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC2.79□□□□□ -1.96
SSSCA1O60232 MTCYBP31-201ENST00000438855 1122 ntBASIC2.79□□□□□ -1.96
SSSCA1O60232 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.79□□□□□ -1.96
SSSCA1O60232 RPS7P7-201ENST00000463499 571 ntBASIC2.79□□□□□ -1.96
SSSCA1O60232 RPL23AP12-201ENST00000467573 473 ntBASIC2.79□□□□□ -1.96
SSSCA1O60232 SNRPGP3-201ENST00000469405 227 ntBASIC2.79□□□□□ -1.96
SSSCA1O60232 KCTD9P5-201ENST00000504141 1170 ntBASIC2.79□□□□□ -1.96
SSSCA1O60232 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SSSCA1O60232 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.79□□□□□ -1.96
SSSCA1O60232 AC010200.2-201ENST00000605098 235 ntBASIC2.79□□□□□ -1.96
SSSCA1O60232 XIST_intron.1-201ENST00000619444 68 ntBASIC2.79□□□□□ -1.96
SSSCA1O60232 MIR492-201ENST00000638676 116 ntBASIC2.79□□□□□ -1.96
SSSCA1O60232 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
SSSCA1O60232 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
SSSCA1O60232 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
SSSCA1O60232 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.79□□□□□ -1.96
SSSCA1O60232 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
SSSCA1O60232 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SSSCA1O60232 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.79□□□□□ -1.96
SSSCA1O60232 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SSSCA1O60232 AC017071.1-201ENST00000564407 2204 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 AC032011.1-201ENST00000611703 1549 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 SRP72P2-201ENST00000344851 1979 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 GABPAP-201ENST00000419271 1356 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SSSCA1O60232 MIR30B-201ENST00000384850 88 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 ST13P16-201ENST00000401760 781 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
SSSCA1O60232 AC007899.1-201ENST00000412776 775 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SSSCA1O60232 Z99755.1-201ENST00000414048 380 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.78□□□□□ -1.96
SSSCA1O60232 GAS5-208ENST00000425771 242 ntTSL 3 BASIC2.78□□□□□ -1.96
SSSCA1O60232 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC2.78□□□□□ -1.96
SSSCA1O60232 HMGB3P11-201ENST00000440127 604 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 AC007967.1-201ENST00000455422 1159 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.78□□□□□ -1.96
SSSCA1O60232 RPS29P33-201ENST00000456717 146 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 AP002884.2-201ENST00000471647 395 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 AC092451.1-201ENST00000480211 153 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 RN7SL459P-201ENST00000481078 302 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.78□□□□□ -1.96
SSSCA1O60232 OR5H3P-201ENST00000502817 919 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 SMARCE1P4-201ENST00000523647 241 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
SSSCA1O60232 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.78□□□□□ -1.96
SSSCA1O60232 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.78□□□□□ -1.96
SSSCA1O60232 MIR4716-201ENST00000579628 84 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.78□□□□□ -1.96
SSSCA1O60232 NPM1P45-201ENST00000583151 559 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 MIR5187-201ENST00000583479 76 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.78□□□□□ -1.96
SSSCA1O60232 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.78□□□□□ -1.96
SSSCA1O60232 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC2.78□□□□□ -1.96
SSSCA1O60232 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SSSCA1O60232 RNU1-30P-201ENST00000606575 163 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SSSCA1O60232 AC004241.3-201ENST00000611728 517 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SSSCA1O60232 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SSSCA1O60232 U4.6-201ENST00000621618 127 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 AC004943.3-201ENST00000624116 600 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms