Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 HPRT1P2-201ENST00000505250 544 ntBASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 AC108475.1-201ENST00000507880 950 ntBASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 KRT19P6-201ENST00000510983 209 ntBASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 AC099522.1-202ENST00000514718 367 ntBASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 TRAV11-201ENST00000539512 339 ntBASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 AC079610.2-201ENST00000604818 690 ntBASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 AC090246.1-201ENST00000616499 426 ntBASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 AL359715.5-201ENST00000623431 443 ntBASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 AC048347.1-201ENST00000624621 427 ntBASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 MIR383-201ENST00000362257 73 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 AL589655.1-201ENST00000405398 482 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 RPL31P2-201ENST00000413849 377 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 LINC01347-201ENST00000417964 355 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 RPL37P1-201ENST00000432310 284 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 BTF3P10-201ENST00000433415 495 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 AC006994.1-201ENST00000438212 839 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 PPIAP17-201ENST00000438507 471 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 AL356535.1-201ENST00000440335 398 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 AL590399.6-201ENST00000446396 307 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 MTND2P25-201ENST00000449028 610 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 RPL36AP13-201ENST00000457490 317 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 AC106806.2-201ENST00000509365 500 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 AC008494.2-201ENST00000514544 370 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 SNORA31.13-201ENST00000516624 135 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 RNU7-143P-201ENST00000516781 65 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 RN7SKP283-201ENST00000517197 270 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 MTND2P26-201ENST00000528255 1029 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 AC107016.1-201ENST00000550463 337 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 AC022968.1-201ENST00000567372 442 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 IPO5P1-202ENST00000600039 287 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 AC104662.1-201ENST00000604448 511 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 AC110741.2-201ENST00000605278 268 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 AC011374.2-201ENST00000607135 526 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 MIR7151-201ENST00000617477 60 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 MIR3653-201ENST00000625572 110 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 FAM35DP-201ENST00000323387 2712 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 AC116096.1-201ENST00000566804 2314 ntBASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.54□□□□□ -1.84
RHBDD3Q9Y3P4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 MIR607-201ENST00000385241 96 ntBASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 BTBD10P2-201ENST00000404779 676 ntBASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 AL355379.1-201ENST00000405542 640 ntBASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 FAR2P2-201ENST00000413041 594 ntBASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 RPL23AP38-201ENST00000423801 469 ntBASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 ATP5HP2-201ENST00000433885 485 ntBASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 RPS26P40-201ENST00000435209 294 ntBASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 MTND2P21-201ENST00000436242 1042 ntBASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 AC073143.1-201ENST00000436316 395 ntBASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 NPM1P49-201ENST00000448027 714 ntBASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 AL133477.1-201ENST00000457472 514 ntBASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 RNA5SP246-201ENST00000458909 119 ntBASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 UQCRHP4-201ENST00000471686 272 ntBASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 AC091167.1-201ENST00000492017 396 ntBASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 RN7SKP96-201ENST00000516948 297 ntBASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 OR4R3P-201ENST00000525084 838 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms