Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 POLHP1-201ENST00000411806 470 ntBASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 AC234771.2-201ENST00000445718 597 ntBASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 COX4I1P2-201ENST00000447446 547 ntBASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 AC026254.2-201ENST00000475295 371 ntBASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 AC093852.1-201ENST00000503587 266 ntBASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 HMGN1P16-201ENST00000508308 283 ntBASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 RNU6-62P-201ENST00000516526 102 ntBASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 RNU6-307P-201ENST00000516743 106 ntBASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 IGLV3-6-201ENST00000523937 250 ntBASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 AP003733.2-201ENST00000529409 171 ntBASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 SETP2-201ENST00000553886 926 ntBASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 RPL21P12-201ENST00000559810 515 ntBASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 MRPL57P1-201ENST00000621486 265 ntBASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 HDAC1P2-201ENST00000453661 1398 ntBASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 RNU6-251P-201ENST00000363235 104 ntBASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 RNU6-853P-201ENST00000364306 107 ntBASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 RNA5SP77-201ENST00000365394 120 ntBASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 AL023284.3-201ENST00000407767 334 ntBASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 RN7SKP281-201ENST00000410472 352 ntBASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 RPL12P34-201ENST00000424532 479 ntBASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 AL645939.3-201ENST00000435408 225 ntBASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 AC005165.2-201ENST00000466070 380 ntBASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 AC011005.3-201ENST00000491624 395 ntBASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 AL117692.1-201ENST00000494283 713 ntBASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 AC139272.1-201ENST00000505516 640 ntBASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 RNA5SP503-201ENST00000517047 117 ntBASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 AP003497.1-201ENST00000528472 562 ntBASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 CBX3P4-201ENST00000538909 354 ntBASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 AC244034.2-201ENST00000562504 509 ntBASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 MIR5583-1-201ENST00000580941 59 ntBASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 IGKV2OR2-1-201ENST00000605129 304 ntBASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 AL445647.2-201ENST00000615170 130 ntBASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 AC023509.5-201ENST00000617434 807 ntBASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 AC130454.1-201ENST00000622948 401 ntBASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 SAGE3P-201ENST00000619800 1635 ntBASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 AC110373.1-201ENST00000505994 3505 ntBASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
TRIM35Q9UPQ4 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 RN7SKP250-201ENST00000363924 321 ntBASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 RNU6-744P-201ENST00000365557 107 ntBASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 RNU6-398P-201ENST00000384143 109 ntBASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 RNU6-1316P-201ENST00000384242 108 ntBASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 MIR1298-201ENST00000408783 112 ntBASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 RPS18P1-201ENST00000447840 458 ntBASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 FCF1P4-201ENST00000448326 183 ntBASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 AL049830.2-201ENST00000480072 201 ntBASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 PRMT5P1-201ENST00000514351 598 ntBASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 RNA5SP384-201ENST00000516615 116 ntBASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 AP002392.1-201ENST00000537692 208 ntBASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms